Alistipes shahii: AL1_16110
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Entry
AL1_16110 CDS
T02578
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ash
Alistipes shahii
Pathway
ash03030
DNA replication
ash03410
Base excision repair
ash03420
Nucleotide excision repair
ash03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ash00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AL1_16110
03410 Base excision repair
AL1_16110
03420 Nucleotide excision repair
AL1_16110
03440 Homologous recombination
AL1_16110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ash03032
]
AL1_16110
03400 DNA repair and recombination proteins [BR:
ash03400
]
AL1_16110
Enzymes [BR:
ash01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AL1_16110
DNA replication proteins [BR:
ash03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AL1_16110
DNA repair and recombination proteins [BR:
ash03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AL1_16110
NER (nucleotide excision repair)
GGR (global genome repair) factors
AL1_16110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
DUF3913
Motif
Other DBs
NCBI-ProteinID:
CBK64011
UniProt:
D4IM49
LinkDB
All DBs
Position
1843274..1846150
Genome browser
AA seq
958 aa
AA seq
DB search
MKKLFLVDAYALIFKYYYAFLGRPMRNREGMNTSVVFGFVKFLRDIQKRERPDLLGVAFD
PKGGSFRRDIFPEYKANRSETPEDILLSIPYVKRVLDAMCIPILEVAGYEADDVIGTLSQ
KGVEAGYDVYMVTPDKDYGQLVRDNCRIYKQRGAEGSIEIVDREAIREKYGIDDPQLVRD
ILALWGDASDNIPGVPGIGEKIACKLVREWGTVENILENVGKIPGKQGEKIAGWADNLRL
AKRLTTICLDVPIPFREEDLTVCDPHIDQLRGIFAELDFKAFMNDLTNLAPAEPLPEGPR
QEAQTQLAEMARAKSAAAKKAALAGQGNLFGDPVVPLPAAQEVPVAELQAEAEAIQFRTA
QTTPHEYTLVETAAQLREVVAAVGRYPEFCFDTETTGFDIFNDRIVGLSLAVEPFKAWYV
PFLEKDTPEYAEIVRPLFEDEKIAKIGQNIKFDLMVLRRLGITIRGRMYDTMILHYLLDP
ESRHNMNALAEKYLNYKPIEIETLIGKGSKQLTMDLVNVERVKEYAAEDADVTLQLKQAL
YPMIEQIGLQHLYFEIEEPMIAVLADIEMAGMRIDSEALAVYAVELNRKLAELEAAIRTE
AGEPNLNINSARQLGEVLFGKMRIAEKPKMTKTKQFCTDEDYLQLFARKHRIVDLILEYR
GVKKLLSTYVEALPQLVNRSTGRIHTSFNQAVTATGRLSSTNPNLQNIPVRDDMGRRIRK
AFIPSDDDHLLLSADYSQVELRLMAHLSGDESLIAAFEHGEDIHAATAAKLFNKTLDEVT
SEERRRAKTANFGIIYGISAFGLSQRLEIPRKEAKEIIDGYFASYPGVKKYMDNVVEKAK
EEGFVSTIFGRRRYLNDIASHNAIARGLAERNAVNAPIQGSAADIMKIAMINVHRRFAAE
GIRSRVILQVHDELVVDMLRSEQERVTAIVTECMESAAQLKVRLIADAGVGGNWLEAH
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactctttctggtcgacgcctatgcgttgattttcaagtattactatgccttt
ttgggccgtccgatgcgtaaccgcgaggggatgaacacctccgtggtgttcggcttcgtg
aagttcctgcgcgacatccagaaacgcgaaaggcccgatctgttgggcgtggcgttcgat
cccaagggcggcagcttccgccgcgacatctttccggaatacaaggccaaccgttccgaa
acccccgaggacatcctgctttcgataccctacgtgaaacgggtgctcgacgcgatgtgc
attccgattctcgaagtggcgggttacgaggccgacgacgtgatcggaaccctctcgcag
aagggtgtcgaagccggttacgacgtctatatggtgacgcccgacaaggattacggccag
ctggtgcgcgacaactgccgcatctacaaacagcggggcgccgagggcagcatcgagatc
gtcgaccgcgaggccatccgcgagaagtacggcatcgacgacccgcagctggtgcgcgac
atccttgcgctgtggggcgatgcctcggacaatattcccggcgtcccgggcatcggcgag
aagatcgcctgcaaactggtccgggagtggggaacggtggaaaacattctggagaatgtc
ggcaaaattcccggaaagcagggcgagaagatcgccgggtgggccgacaacctgcggctg
gccaagcgcctgacgaccatctgcctcgacgtgccgatccctttccgcgaggaggacctc
acggtttgcgacccgcatatcgaccagctgcgcgggatcttcgccgaattggatttcaag
gcttttatgaacgatctgacgaacctcgcacccgccgagccgcttcccgaaggtccgcgt
caggaggcgcagacccagctggcggagatggcccgcgccaagtcggccgcggcgaagaag
gccgcgctggcgggacagggcaatctgttcggcgaccccgtcgtgccgcttcctgcggcg
caggaggttcctgtggccgaacttcaggccgaagccgaggcgatacagttccggacggcc
cagacgacgccccacgagtacacgcttgtggaaactgccgcgcagctgcgcgaggtggtc
gccgcggtcggcagataccccgaattctgtttcgacaccgagaccacgggtttcgacatc
ttcaacgaccgcatcgtcgggctgtcgctcgccgtggaaccgttcaaagcgtggtacgtg
cctttcctggagaaggatacgcccgagtatgcggagatcgtgcggccgctgttcgaggat
gagaagatcgccaagatcgggcagaacatcaagttcgacctgatggtgctgcgccggctg
ggcatcacgatccggggccgcatgtacgacacgatgatcctccactacctgctcgatccc
gagtcgcgccacaacatgaacgcccttgcggagaaatacctcaattacaagcccatcgag
atcgaaacgctcatcggcaaaggctcgaagcagctgacgatggaccttgtgaacgtcgaa
cgcgtcaaggagtacgctgccgaggatgccgatgtgacgctgcaactcaagcaggcgctc
taccccatgatcgagcagatcggcctccagcacctctatttcgagatcgaggagccgatg
atcgccgtgctggccgacatcgagatggcgggcatgaggatcgactccgaagcgctggcg
gtctatgccgtcgagttgaaccgcaaactcgcggaactggaggcggcgatccgcaccgag
gcgggcgaaccgaacctgaacatcaactcggcgcgccagctgggcgaggtgcttttcggg
aaaatgcgcattgccgagaagcccaagatgaccaagaccaagcagttctgcaccgacgag
gactacctccagttgttcgcccgcaaacaccggatcgtcgatctgatcctcgaataccgg
ggcgtgaagaaactgctttcgacctatgtcgaggcgctgccccagctggtcaaccgctcg
acggggcgcatccacacctcgttcaaccaggccgtgacggccacgggacgcctttcgtcg
acgaatcccaatttgcagaacatccccgtccgcgacgacatgggccgccgcatccgcaag
gcgttcatcccctcggacgacgatcacctgctgctttcggccgattacagccaggtcgaa
ctgcggctgatggcccacctttcgggcgacgagtcgttgatcgcggccttcgagcacggc
gaggatatccatgccgccacggccgccaagctcttcaacaaaacgctcgacgaggtgact
tccgaagaacgccgccgggccaagacggccaatttcggcatcatctacggcatttcggcc
ttcgggctgagccagcggctcgaaattccgcgcaaggaggccaaggagatcatcgacggc
tatttcgcctcctaccccggggtcaagaagtatatggacaacgtggtcgagaaggccaag
gaggagggtttcgtctcgacgattttcggccgccgccgctacctcaacgacatcgcgtcg
cacaacgccatcgcccgcggccttgccgagcgcaacgccgtgaacgccccgattcagggt
tctgcggccgacattatgaagatcgccatgatcaacgttcaccggcgtttcgccgccgaa
ggcatccgctcgcgggtgatcctgcaagtgcacgacgaactggtggtcgacatgctccgc
tcggagcaggagcgtgtcacggcgatcgtcaccgagtgcatggagtccgccgcgcagctc
aaggtccggctgatcgccgacgccggcgtgggcggcaactggctggaagcgcattga
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