Alistipes shahii: AL1_16850
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Entry
AL1_16850 CDS
T02578
Name
(GenBank) Transcriptional regulator
KO
K21900
LysR family transcriptional regulator, transcriptional activator of the cysJI operon
Organism
ash
Alistipes shahii
Brite
KEGG Orthology (KO) [BR:
ash00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ash03000
]
AL1_16850
Transcription factors [BR:
ash03000
]
Prokaryotic type
Helix-turn-helix
LysR family
AL1_16850
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
PBP_like
MarR_2
HTH_24
HTH_20
Motif
Other DBs
NCBI-ProteinID:
CBK64074
UniProt:
D4IMB2
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Position
1935053..1935940
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AA seq
295 aa
AA seq
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MDDFRLKVFIAAARTLSFTRAAEQLYISQPAVSKHVGELESRYKVQLFTRRGSHLELTDA
GRTMLEAAGRLLDDYRRLEYEMSLCADQTGGELRLGASTTIAQYLLPPILAHFTARFPGV
RVSMSSGNSAEVEQALGEHAVDLGLVESLSRRQGLHYTLFRPDELVLVARPGGKYARRET
VTPEELPRIPLVLRESGSGTLEVIAAALAARGIRLSQFDVTMRLGSTEGIKAFVRNSDAM
AIVSVISVVDELRSGALRIVDIEGLTLSRDFVFVHAEAEPARLARRFIDFARADF
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggacgatttccgcctcaaggtctttatcgccgcggcccggacgttgagtttcacccgg
gccgccgaacaactctacatttcgcagcccgccgtcagcaagcatgtcggcgagctggaa
tcccgttataaggtgcagcttttcacccgccgcggcagccatctggagctgaccgatgcg
gggcgtacgatgctggaggcggccgggcggcttctcgacgactaccgccgcctcgaatac
gagatgagcctctgcgccgaccagaccgggggcgaactccgcctcggggccagcacgacc
atcgcgcagtacctccttccgccgattctggcgcacttcacggcgcgctttcccggggtg
cgggtctcgatgtcgtcgggcaacagcgccgaggtcgagcaggcgttgggcgaacatgcc
gtggatctggggctggtcgagagcctcagccgccggcaggggctgcactacacgcttttc
aggcccgacgaactggtgctggtggcccgtccgggcgggaaatacgcccgccgggagacg
gtgacgcccgaggagctgccgcgcatcccgctggtgttgcgcgaaagcggctcggggacg
ctcgaagtgatcgccgcggcccttgcggccagaggcatccgtctctcgcagttcgatgtg
acgatgcgcctcgggtcgaccgaggggatcaaggccttcgtccgcaacagcgacgccatg
gccatcgtatcggtgatttcggtggtggatgaactgcgcagcggcgcgctgcggatcgtc
gacatcgaggggctgacgctctcccgcgatttcgttttcgtgcatgccgaagccgaacct
gcgcgtctggcgcggcggttcatcgacttcgcccgggcggatttctga
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