Alistipes shahii: AL1_17290
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Entry
AL1_17290 CDS
T02578
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ash
Alistipes shahii
Brite
KEGG Orthology (KO) [BR:
ash00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ash03016
]
AL1_17290
Enzymes [BR:
ash01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AL1_17290
Transfer RNA biogenesis [BR:
ash03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AL1_17290
Prokaryotic type
AL1_17290
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PG_binding_2
DUF664
SAM_PNT
Motif
Other DBs
NCBI-ProteinID:
CBK64113
UniProt:
D4IMF1
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All DBs
Position
complement(1983261..1983977)
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AA seq
238 aa
AA seq
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MKEALDLRGINFEDGYIAVVDKPLRWTSTDVVRKIKFALRRLGYRKIKVGHAGTLDPLAT
GILLVCIGRATKLVDALQAEEKEYVADVMLGATTPSHDLEHEIDRTYPWEHITREAVAEA
LASLTGERLQTPPVYSAKKIDGTRAYELARAGEEVAVRQALINIYEMEIVEYDLPRVRIR
VRCSKGTYIRSLAHEIGQALRSGAHLTSLRRTRSGGFTLEKSYELDEFLENLQKLETK
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagcactggacctccgcggcatcaatttcgaggacggatacatcgccgtcgtg
gacaagcccctgcgctggacctcgaccgacgtggtgcgcaaaatcaaattcgcgctccgc
aggctgggttaccgcaaaatcaaggtcggacacgccgggacgctcgacccgctggccacg
ggcatcctgctggtctgcatcggccgcgccaccaaactcgtcgacgccctgcaagccgag
gagaaggagtatgtggccgacgtgatgctgggcgccacgaccccgagccacgatctggaa
cacgagatagaccggacctacccgtgggagcacatcacgcgggaagcggtcgccgaagcc
ctcgcctcgctcaccggcgagcggctccaaaccccgcccgtctactcggccaagaagatc
gacggcacacgggcctacgaactggcccgcgccggcgaggaggtcgccgtacgccaggcg
ctgatcaacatttacgaaatggagatcgtggaatacgacctgccgcgggtgcgtatccgc
gtgcgttgcagcaagggaacctacatccgctcgctggcccacgagatcggacaggcgctc
cgcagcggggcgcacctcacctcgctgcgccgcacgcgcagcggcggcttcacgctcgaa
aaatcctatgagctggacgaatttcttgaaaatctgcaaaaacttgaaacaaaatag
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