Alistipes shahii: AL1_18270
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Entry
AL1_18270 CDS
T02578
Name
(GenBank) Uncharacterized protein conserved in bacteria
KO
K09800
translocation and assembly module TamB
Organism
ash
Alistipes shahii
Brite
KEGG Orthology (KO) [BR:
ash00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ash02000
]
AL1_18270
Transporters [BR:
ash02000
]
Other transporters
Pores ion channels [TC:
1
]
AL1_18270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
DUF748
YhdP
Motif
Other DBs
NCBI-ProteinID:
CBK64197
UniProt:
D4IMN5
LinkDB
All DBs
Position
complement(2071139..2075824)
Genome browser
AA seq
1561 aa
AA seq
DB search
MLKKILKHTLRTLLVILLVLLLVPALLYVPAVQDLARRRAVAYASRTLGMEVSVERIRLA
FPLRLTVDNTLLADRTDTLLRCGRLSLDAALWPLIRKEVVIRSFALERVAAHYKDTLAGM
DLRLAAGELSLEAVRADLSANTAGISRLVLADADIRLNLTEAAPAEKKESAAALPWTVGL
DRIAVSSLAFGMRTSPAVSELSVRLADGSVDTCRVLLDSQQVSVKSVLLDRGAYSYLTGP
AEAESGTSAGTTEASAPWTVRVGRVALTDNSVEYGRLGHRPAAGFDPAFIALAPLDLTID
SVYNRGADIALQIRRTAFTERCGLSVRDLTGRFGMDASGIVLSGLDLQTAFSRIRAELTA
GAGILKLEPASPLDAALSADLNTKDLKYLSPEAVPPVLDDRTVRLSFSAAGTLSDLGKTQ
LEISSPGHLDLKADAAAKNLLDANRMEASARFEGDFRDLAFLKALLPDTVLRRRVAIPAL
IRLRGSAGADRGTFSTASTLSADGGELSVKGRFNPREQSYDAAIRADSFPLNSFLPADSL
GIVDLALQARGTGFDPLLPRTRTSLRAQIDRAEFGGRDFGGIELDAELDSQRLSGRISDR
DEALRLLLSVSGTLTEREQRIGLSGSVFGFDLAALGVSPEPIGGSFALDASASAAGKGAY
AARIALDSIEIRNKHRTDRIRPTSVSLHTDSAATRAEAASGDLSLTFSTPQSADSLIAAL
TRSARTLAGQIDAQSIDMEQLKPALPDFALRVSAGPDNILNSLLKSRKIAFDALNAEGAN
CDSLPVSIRLRTEGLAYGNVVLDTVTADIRQNGKRLEYALGLANAPENLDNIARAGLYGH
LVRNTGQANLYQRNRAGREGFRFGLDVTWTDSLVRASVTPPDPLFGFEPWTVNRGNYLAY
RFDKRVEADLDMTHGDQRFAIRTTPGGDADDDIRLDIAGLNVGPALGLFPSAPPVDGVLG
ANLTLNLAADSLSLRGGVSVAELTYDKQRFGSVDLGLFYKQDRGHLADARLTLDGAEVLT
VQGDCREGRESPLDLTVTVPGFPLQRANVFLPADLLRLSGSLQARVHAGGTPERPKLDGG
VRFAGTDVRVPMIGTSFGLSADTIRIAGSRILFDEYAVYAPNKSALTVGGEVSLADFGRM
TADLALRASDFQFVDVARKAGTAVYGKAYLDLGATTKGPVDELVVRGNVALLGGTDINYV
MQDSPMDVKERPQNVVTFVSFSELDTQTPDDTPQEVRIGGMDVLINVDINNDVQAAVDLS
ADGSNRIDLRGGGNLTYTMNPLGDVRLSGKYVLSGGSVRYNPPVISQKIFKITPDSYVEW
IGDIADPAFNITAVETVRANVSSDGQDSRPVNFDISINIRNSLNDLAISFGLAAPEDLAM
QNQLNSLTAEQRANQAMNLLIYNTYTGPGTTAKVSSENPLNTFIQKELNQWAQNNLKGVD
LSFGIDSHGEDDPNGQRTDYSYRLSKNLFNNRVRAVIGGKFSTDADPSQNLKENLIDDIS
LEYMLTKRDNMYLKVFRHTGYESILEGEITETGVGFVIRKKLSRLGDLFKPMRPKTKKPR
K
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaaaattctcaaacatacgctccggacgctgctcgtcattctcctcgtcctg
ctgctggtcccggcgctgctctatgttccggccgttcaggacctggcccggcgacgggcc
gtcgcctatgcctcccggacgctcggcatggaggtctccgtcgaacgcatccgcctcgcc
tttccgctgcggctgacggtggacaacaccctgctggccgacaggacggacacgctcctt
cgctgcggaaggctctcgctcgacgccgccctgtggccgctgatccgcaaagaggtcgtc
atccggagcttcgcgctggaacgcgtcgccgcccactacaaggacaccttggcgggcatg
gatctgcgcctggctgcgggagagttgtccctcgaagccgtccgcgccgatctttcggcc
aacacggccggcatctcccggctcgttctcgccgacgcggacatccggctgaacctgacc
gaagcggctcccgccgagaaaaaggagagcgccgccgccctgccgtggacggtgggactc
gacagaatcgcggtctcgagcctcgccttcgggatgcggacctcccctgcggtctccgaa
ctctccgtccgcctggccgacgggagcgtcgacacctgccgggtgctgctggacagccag
caggtctccgtgaaaagcgtcctgctcgaccggggcgcctactcctacctcaccggaccg
gccgaagcggaaagcgggacttccgccgggacgaccgaagcgtcggcaccatggaccgtc
cgggtcggccgcgtcgcgctgaccgacaacagcgtcgaatacggccggctgggccaccgt
cccgccgcggggttcgacccggcgttcatcgccctcgcgccgctcgacctcacgattgat
tcggtgtacaaccggggcgccgacatcgcgctgcaaatccgccggacggcgttcaccgaa
cgctgcgggctttcggtccgcgacctgaccggacgtttcggcatggacgcctcgggcatc
gtcctctccggcctcgacctgcaaaccgccttctcccgaatccgggcggagctcaccgcc
ggggccggaatcctgaaactggagccggcttcgccgctcgacgccgccctttcggccgac
ctgaacacaaaggacctgaaatacctctccccggaggcggtcccgcccgtgctggacgac
cggaccgtccggctatcgttctccgcggcgggaactctgagcgacctcggaaagacgcag
ctggaaatctcgtcgcccggacacctcgacctcaaggccgacgccgcggcgaaaaacctg
ctcgacgccaaccggatggaggcgtcagcccgcttcgagggcgacttccgggaccttgcg
ttcctcaaggcgctgctccccgacacggtcctgcggaggcgcgtggcgattccggccctg
atccggctccgcggctccgccggggcggacagggggacgttctcgacggcttcgacactc
tcggccgacggcggcgaactttccgtgaaggggcggttcaacccccgcgaacagagttac
gacgccgcgatccgggccgacagcttcccgctcaacagtttcctcccggccgattcgctg
gggatcgtcgacctggccctgcaagcccgcggcacgggcttcgacccgctgctgccccgg
acccggacgagcctccgggcgcagatcgaccgcgcggagttcggcggacgcgacttcggg
ggcatcgaactcgacgcagaactcgacagccagcgtctttcgggacggatctccgaccgc
gacgaggcgctccggctgctgctgtccgtctccggaacgctgaccgaacgcgaacagcgc
atcggcctctcgggcagcgtcttcgggttcgacctggccgcgctgggcgtcagcccggag
ccgatcggcggatcgttcgccctcgatgcctccgcatccgccgccggaaagggggcctat
gccgcccgcatcgcgctggacagcatcgaaatccggaacaaacaccggacggaccgcatc
cgcccgacgagcgtctcgctgcacaccgactcggccgcaacccgggccgaagcggcttcc
ggcgacctgtcgctgacgttctccacgccccaatccgctgactcgctgatcgcggcgctg
acccggagcgcccggacgctggccggacagatcgacgcgcagagcatcgacatggagcaa
ttgaaacccgcgctccccgacttcgccctgcgggtctcggcgggtcccgacaacatcctc
aacagcctgctgaaatcccggaagatcgccttcgacgcgctgaacgccgaaggggcgaac
tgcgactcgctgcccgtttcgatccgcctgcgcacggagggactggcctacgggaacgtg
gtcctcgacaccgtgacggccgacatccgccagaacgggaaacggctggaatacgccctc
gggctggcgaacgcccccgagaacctcgacaacatcgcccgggccggactgtacggccac
ctcgtgcggaacaccgggcaggcgaacctttaccagcgcaaccgcgccggccgcgaagga
ttccgcttcgggctggacgtgacgtggaccgacagcctggtccgcgcgagcgtgacgcct
cccgacccgctgttcggtttcgagccgtggacggtcaatcgcggcaactacctcgcatac
cgcttcgacaagcgcgtggaggccgacctcgacatgacccacggcgaccagcggttcgcg
atccgcacgaccccgggcggcgacgccgacgacgacatccgcctcgacatcgccggactg
aacgtcggtccggcgctggggctgttcccctcggccccgcccgtcgacggcgtgctgggc
gcgaacctgacgctgaatctcgcggcggacagcctctccctccggggcggggtctcggtg
gcggagctgacctacgacaaacagcgtttcggcagcgtcgacctcgggctgttctacaaa
caggaccggggacacctcgccgacgcgcgtctgacgctcgacggagccgaggtgctgacc
gtgcagggggactgccgcgaggggcgcgaaagcccgctcgacctgacggtgaccgtcccg
ggcttccccttgcagcgggccaacgtcttcctgcccgccgacctgctccgcctttcgggc
agccttcaggccagggtccacgcgggcggcactcccgagcggccgaaactcgacggaggc
gtgcggttcgccgggaccgacgtccgcgtcccgatgatcggcacgtcgttcggcctctcc
gcggacacgatccgcatcgccggcagccgcatcctgttcgacgaatacgcggtttacgcc
ccgaacaaaagcgcgctgaccgtcggcggcgaggtcagcctcgccgacttcgggcgcatg
acggccgacctcgcgctgcgggcctcggatttccagttcgtcgacgtggcccgcaaggcc
ggcacggcggtctacggcaaggcctatctcgacctcggcgccacgaccaaaggtcccgtg
gacgaactcgtcgtccgcggcaacgtcgccctgctgggcggcacggacatcaactacgtc
atgcaggactcgccgatggacgtgaaggaacgcccgcagaatgtcgtgacgttcgtctcg
ttcagcgagctggacacccaaaccccggacgacacgccgcaggaggtacgcatcgggggc
atggacgtgcttataaacgtcgacatcaacaacgacgtgcaggccgccgtggacctctcg
gccgacggcagcaaccggatcgacctccggggcggcggcaacctcacctacacgatgaac
ccgctgggcgacgtccgcctgtcgggcaaatacgtgctttcgggcggaagcgtgcgctac
aacccgcccgtcatctcgcagaaaatcttcaaaatcacgccggacagctacgtcgaatgg
atcggcgacatcgccgacccggccttcaacatcacggccgtcgagaccgtgcgggccaac
gtctcctccgacgggcaggactcccggccggtgaatttcgacatctcgatcaacatccgc
aactcgctcaacgacctggcgatcagtttcggcctggcggcccccgaggacctcgccatg
cagaaccagctgaactcgctgacggccgagcagcgcgccaaccaggcgatgaacctgctg
atctacaacacctacaccggcccgggaacgaccgcgaaagtcagctccgagaatccgctc
aacacgttcatccagaaggagctgaaccaatgggcgcagaacaacctcaagggcgtggac
ctctccttcggcatcgactcccacggcgaagacgaccccaacggccagcgcaccgactac
tcctaccggctctcgaaaaacctcttcaacaaccgcgtgcgggcggtcatcggcggcaag
ttcagcaccgacgccgacccgtcgcagaacctcaaggagaacctgatcgacgacatttcg
ctggaatacatgctcaccaaacgcgacaacatgtacctgaaagtcttccgccacacgggc
tacgagagcatcctcgaaggcgagatcaccgaaacgggcgtgggtttcgtcatccgcaag
aaactgtcgcggctgggcgacctgttcaagccgatgcgtcccaaaaccaaaaaaccgaga
aaatga
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integrated database retrieval system
