KEGG   Alistipes shahii: AL1_19090
Entry
AL1_19090         CDS       T02578                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
ash  Alistipes shahii
Brite
KEGG Orthology (KO) [BR:ash00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ash02048]
    AL1_19090
Enzymes [BR:ash01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     AL1_19090
Prokaryotic defense system [BR:ash02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   AL1_19090
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N T1R_D3-like ResIII Helicase_C DUF6933 DUF3867 AAA_22
Other DBs
NCBI-ProteinID: CBK64262
UniProt: D4IMV0
LinkDB
Position
2180181..2183222
AA seq 1013 aa
MHFTEDDFENAILELFREQLGYDYVYGPNVIRDYAEPLYVEALEAVLPQINRGLPQAAID
EAMVKIRTYEGGTLVQKNELFTDYLQNGVAVNYFDGREQCSANVRLVDYDSPLHNRFTIA
NQWTVDGHSVRRADMIVFVNGLPLVVVELKSPSRENTDVSEAYAQLRNYMQEIPSLFIYN
AFCVMSDQGMTKAGTITAGEDRFMQWKTVDGSYEDTHSANFDVLFAGMFEKTRFVELLRN
FICYSKDGKQRVKILSAYHQFYAVRKAVLSTVKAAETDGRGGVFWHTQGSGKSLSMVFFA
KQLQQAMSSPTIVVLTDRNDLDGQLYRQFACCRDFLRQTPVQAESRAHLRELLAGREANG
IFFSTMQKFEESEEPLSIRRNIVVMADEAHRSQYGLEERVRMVTDADGVMQAKVVIGAAR
LVRNALPNATYIGFTGTPIAQKDRSTREVFGDYIDVYDMTQSVDDGATRPVFYESRVINL
KLDEQTLRRIDAEYDAMAEEAEEYVIEKSKRELGRLDSIFGADATVASLCEDIVKHYEEF
RQYEQTGKAMIVAYSRPIAIKIYRRILEMRPVWGDKLAVVMTSGNKDPEDWRAIIGNDSH
KKELEKRFKDNDSSLKIVIVVDMWLTGFDVPSLSTMYVYKPMSGHNLMQAIARVNRVFGD
KQGGLVVDYVGIASALKTAMNDYTYRDRKNYGDTDVAKTAYPEFQKKLDVCRDLMYGFNY
GAFFGKSDLERAKAISGGVDFMQSPERMETKKLYIKEALLLRQALSLCQSLLNYEQRIEA
AYFEAVRTLLTRVEGKGKISFREINGRINELLKQSIKSEGVINLFSDIKEEFSLFDPKFL
EEVARMKERNFAVELLRRLIAEQVQLYQRTNTVRAEKFSEILSDAMSRYLKGMLTNEEVI
EELLKIAREIVFGEKAGESLNLNSEELAFYDALTKPEAVKDFYSNDQLIAITRELTDALR
RNKTIDWNMKESARAGMRRIVKRLLKKYDYPPAGQEDALNTIMEQCKKWNENN
NT seq 3042 nt   +upstreamnt  +downstreamnt
atgcacttcaccgaagatgattttgaaaacgccattctcgagttgtttcgagagcaatta
ggttacgattatgtgtacggccccaatgtgatacgcgactatgcagaaccgctttacgtg
gaggcgctggaggctgtgttgccgcagatcaatcgtggtctgccacaggccgctattgac
gaagccatggtgaagattcgaacttatgagggtggaacgttggtacagaagaatgaattg
ttcacggattacttgcaaaatggcgtagctgtcaattatttcgatggccgcgagcaatgc
tctgcaaatgtccggcttgtcgattatgattcaccattacataatcggtttacaatcgct
aatcaatggacggtcgatgggcactcggtaaggcgtgcggatatgatcgtatttgtcaat
ggattgccgctggtggtggtcgagctcaaatcgccctcgcgtgagaatacggacgtgtcg
gaagcttatgcacaattgcgtaactatatgcaggagattccgtcactctttatctataac
gctttttgtgtgatgagcgatcaggggatgactaaggcggggacgatcacggcgggtgaa
gaccgttttatgcagtggaagacggtggatgggagttatgaggatacccatagcgcgaat
ttcgatgtgcttttcgcgggaatgttcgaaaaaacgcggtttgttgaattgttgcggaat
tttatttgctactcgaaagacggtaaacagcgcgttaagatattaagtgcctatcatcag
ttttatgccgtacgcaaggctgtgctttcgacggtcaaagcagctgagacggatggtcgg
ggtggcgtgttttggcatacgcagggcagcggaaagtcattgtcgatggtctttttcgcc
aagcagttgcagcaggcgatgtcgtcgccgacgattgtcgtgctgacagaccgtaacgat
ttggacggccagttgtaccggcagttcgcttgttgcagggattttttgcgtcagacaccc
gtgcaagccgaaagtcgggctcatcttcgggaattattggcgggacgcgaagcgaacggt
atctttttctcgacgatgcagaaattcgaggagagcgaagaaccgctttcgatacgacga
aacatagtcgttatggccgacgaggcgcatcgcagtcaatatggattggaggagagggtc
cgaatggttacggatgctgacggggtgatgcaggccaaagttgtaatcggcgcggcgcgt
ctggtgcgtaatgcgttgccgaatgctacctatatcgggtttaccggaacgcctattgcg
caaaaagatcggtcgacacgcgaagtattcggcgattacatcgacgtgtacgatatgacg
cagtcggtggatgacggtgcgacacggccggtattttacgagagccgtgtaatcaatctg
aaactcgacgagcagaccttgcgacgtattgatgcggagtatgatgcgatggccgaggaa
gcggaagagtatgtcattgagaaaagcaagcgtgaattggggcggctcgattcgatcttt
ggagctgacgcgacggtggcatcattgtgcgaggacatcgtaaaacactatgaggaattc
cggcaatacgagcagacgggtaaggcgatgatagtagcctattcgcggccgatagcgatc
aagatttaccgtcggattctcgaaatgcgcccggtatggggtgacaagctggctgttgtg
atgacttccggtaataaagatccggaagactggcgggcgattatcggaaatgattcccac
aagaaagagttggagaagaggttcaaagacaacgacagctcgttgaaaatcgtcatcgta
gttgatatgtggcttacgggtttcgacgtaccttcgctttcgacgatgtatgtttataaa
ccgatgtccggacacaatctaatgcaggctattgctcgtgtgaatcgtgtgttcggggat
aaacaaggcggtttggttgtggattatgtgggtatcgcttcggcgttgaagacggcgatg
aacgattatacataccgtgaccgcaaaaattatggtgatacggatgtggctaaaaccgcc
tatccggagtttcaaaagaaactggacgtttgccgtgatctgatgtatggattcaattat
ggcgctttcttcggtaagtctgatttggagcgggcgaaagccatcagcggaggtgtcgat
ttcatgcagtcccctgagcggatggaaacgaaaaaactctatatcaaagaggcgctgctg
ctgcggcaggcattgtcgctttgtcagagtttgctgaattacgagcagcgtatcgaagct
gcctattttgaggcggtgcgcacattactgacgcgcgtggagggcaagggtaagatttcg
ttccgtgagatcaacgggcgtattaatgaattgctcaagcagagtatcaagagcgaaggg
gtaattaatcttttctccgatattaaggaggagttctctttgttcgatccgaaattcctt
gaagaggttgcccggatgaaggaacggaatttcgccgtagaattattgcgtaggttgatt
gcagaacaggtacaactatatcagcgaacgaatacggtacgagccgagaagttttcggaa
attctgtccgatgccatgagtcgctatttgaaagggatgctgacgaacgaagaggttatc
gaagaattactgaaaatagcccgtgagatcgttttcggcgaaaaggccggcgagtcgctt
aatctgaacagcgaagaacttgccttttatgatgcgttgaccaagcctgaggctgtaaaa
gatttctattccaacgatcagttgatcgctattacacgtgagctgacggatgcactccgg
cgtaacaaaacgatcgactggaatatgaaggagagtgctcgtgccggaatgcggcgtatt
gtcaaacggttgttgaaaaagtatgattatccgcctgcagggcaggaagatgctttgaat
acgattatggagcagtgtaagaagtggaacgaaaataattga

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