Alistipes shahii: AL1_19220
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Entry
AL1_19220 CDS
T02578
Name
(GenBank) Site-specific recombinase XerD
KO
K03733
integrase/recombinase XerC
Organism
ash
Alistipes shahii
Brite
KEGG Orthology (KO) [BR:
ash00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ash03036
]
AL1_19220
Chromosome and associated proteins [BR:
ash03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
AL1_19220
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Int_N
Integrase_1
Motif
Other DBs
NCBI-ProteinID:
CBK64272
UniProt:
D4IMW0
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All DBs
Position
complement(2195439..2196341)
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AA seq
300 aa
AA seq
DB search
MIADFVRYLEAERRYSPLTVRNYRHDVEQFLAWLGVDDARFEPQRITTDDIREWILYRTE
TGRVSAASMNREISSLRALFRWLLRTGAVGRDVVHPIPSLRTSQRLPAFVPESRMNGIVS
ECECDSEDFVRERNSLIILLLYTCGLRLAELVGIDRDDFSADFSSLRIRGKGDKERIVPM
LEFVREKILHYIGLIERQNICISSEKALFLTHKGKRISRTAVYRTVQEELDRAGVQGKKS
PHVLRHTFATHLLNSGADMREIQELLGHASLQATQVYTHNSIARLREIYAKAHPREKGGK
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccgatttcgtccgatacctcgaagccgaacgccgctactcgccgctcacggtc
cgcaactaccgccacgacgtggagcagttcctcgcgtggctgggggtcgacgacgcacgg
ttcgaaccgcagcggatcaccacggacgacatccgcgaatggattctctaccgcaccgaa
acgggccgcgtgagcgccgcctcgatgaaccgcgagatttcgtcgctgcgtgcgctgttc
cgctggctgctccgcacgggagccgtcggccgcgacgtcgtgcatccgatcccctcgctg
cggacttcgcagcggctgccggccttcgtccccgaaagccgcatgaacggcatcgtcagc
gaatgcgaatgcgacagcgaggacttcgtccgcgagcgcaattcgctgatcatacttctc
ctctacacctgcggcctgcgcctggcggaactggtcggcatcgaccgcgacgatttctcc
gcggacttctcgtcgctgcgcatccggggcaagggagacaaggagcggatagtcccgatg
ctcgaattcgtgcgcgaaaagattttacattacatcgggttaattgagaggcaaaatatt
tgcatttcatcggaaaaagcactatttttaacacacaaaggaaaacgcatatcccggacg
gcggtgtaccgaacggtgcaggaagaactggacagggcgggcgtacagggcaagaaaagc
ccccatgtgctgcggcacacattcgccacccaccttctgaacagcggcgccgatatgcgt
gaaatacaggaactcctcgggcacgcctcgttgcaggccacacaggtctacacgcacaac
agcatcgccaggctccgggagatttacgcgaaggcccatccccgcgaaaagggaggcaaa
tga
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