Alistipes shahii: AL1_20040
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Entry
AL1_20040 CDS
T02578
Name
(GenBank) DNA primase, catalytic core
KO
K02316
DNA primase [EC:
2.7.7.101
]
Organism
ash
Alistipes shahii
Pathway
ash03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
ash00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AL1_20040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ash03032
]
AL1_20040
Enzymes [BR:
ash01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.101 DNA primase DnaG
AL1_20040
DNA replication proteins [BR:
ash03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AL1_20040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_DnaG
DNAG_N
Toprim_2
Toprim_4
Toprim
DnaB_bind
Toprim_3
LcrG
DUF2161
Motif
Other DBs
NCBI-ProteinID:
CBK64331
UniProt:
D4IN19
LinkDB
All DBs
Position
complement(2288155..2290128)
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AA seq
657 aa
AA seq
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MIDRETVDRIYAAANIVDIIGEYVTLKRKGVNYQACCPFHNEKTPSFVVSPSKGVYKCFG
CGKGGNAVTFLMEHENITYPEALKMVAKRYGIEVKEKEMTEEEVRRNDDRESMFALNGWA
AEYFANYLHRETEGQSVGLAYFRQKRGMTDATIRKFGLGFCPAKGDRMSKDALAAGYKQE
FLVSTGLSLQRESDGSLYDRFRDRVIFPVHNISGRIVAFGGRTLRTDKQVAKYQNSPESE
IYSKKRELYGLYFAKKAIQQQDFAIMVEGYTDVISMHQAGVENVVSSSGTSLTTEQIRLL
NRFTKNITVIYDGDSAGIHASLRGIDMILKEGMNVRVVLLPEPEDPDSFARSHTASELQE
YIRANEQDFLEFKAKLLLQDAEGDPIRKAALIADMVQSVSVIPDPIQRSVYIKECARIMD
IDEQILISEVARKRMTTSGDRETDEFLRRQTTLRQREAQQPGVEFVKQVEAGSSFETLER
EIVKYLLKYGHCSFDFKEGRTMVACNVAEVIFSELSDDNIAFRNPVYNKIMAAYREQWAQ
LGTGVEVPAHVFLNHIDPEVCNMSVDILTSDDNYVASELWRRKEIHIDTDAEMLAVGVPK
AVTLYKSKVIEALIKELQGRLGDENISDEEMRDVVQRLTAYNQVKVTIANKIQRLIL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaccgggaaacagtagaccgcatttacgccgccgccaatatcgtggatattatc
ggcgaatacgtcacgctcaaacgcaagggcgtgaactaccaggcgtgctgtccgttccac
aacgagaaaaccccgtcgttcgtcgtgtcgccctcgaagggcgtctacaagtgtttcgga
tgcggcaagggcggcaacgccgtgaccttcctgatggaacacgagaacatcacctatccc
gaggcgctgaagatggtggccaagcgctacggcatcgaggtcaaggagaaggagatgacc
gaggaggaggtgcgacgcaacgacgaccgcgagtcgatgttcgccctgaacggctgggct
gcggagtacttcgccaattacctccaccgcgagaccgaagggcagagcgtgggcctggcc
tatttccgtcagaagcgcggcatgaccgacgccacgatccggaaattcggactgggattc
tgtccggcgaagggcgaccggatgtcgaaggacgccctggcggcgggttacaaacaggag
tttctcgtctcgacggggctttcgctgcaacgcgagagcgacgggtcgctctacgaccgc
ttccgcgaccgtgtgatcttccccgtgcacaacatttcggggcgcatcgtggcgttcgga
ggccgcacgctgcgcaccgacaagcaggtggccaagtaccagaactcccccgagagcgag
atatacagcaagaaacgcgaactttacggtctctatttcgccaagaaggccattcagcag
caggatttcgccatcatggtcgaaggatacaccgatgtgatttcgatgcatcaggcaggg
gtcgagaacgtcgtgtcttcgtccggcacgtcgcttacgacggagcagatacgcctgctg
aaccgctttacgaagaatatcacggtgatctacgacggcgattcggcgggcattcacgcc
tcgctgcgcggtatcgacatgatcttgaaggagggcatgaacgtgcgcgtggtgctgctg
cccgagccggaggaccccgattcgttcgcgcgcagccatacggcatccgagttgcaggag
tatatccgcgccaacgagcaggacttcctggagttcaaggccaaactgctgttgcaggac
gccgagggcgacccgatccgcaaagcggcgctgatcgccgacatggtgcagtcggtgtcg
gtgattcccgatccgattcagcgctcggtctacatcaaggagtgcgcgcggatcatggac
atcgacgagcagatactcatttcggaggtggcgcgcaagcgcatgaccacgtcgggcgac
cgcgagaccgacgagttcctgcgccgtcagacgaccctccggcagcgggaggcgcagcag
cccggggtggagttcgtcaaacaggtcgaggcggggagcagtttcgagacgctggagcgc
gagatcgtgaaatacctgctcaagtacgggcactgctcgttcgatttcaaggagggccgg
acgatggtggcgtgcaacgtcgcggaggtgattttctcggagctcagcgacgacaacatc
gccttccgcaatccggtctacaacaagatcatggcggcctaccgcgagcagtgggcgcag
ctggggacgggggtggaggttccggcgcacgtcttcctgaaccatatcgaccccgaggtg
tgcaacatgtcggtggacatcctcacctcggacgacaactatgtggccagcgagctgtgg
cggcgtaaggagatccacatcgacaccgacgccgagatgctggccgtgggggttccgaag
gccgtgacgctctacaagtcgaaggtgatcgaggcgctgatcaaggagttgcagggccgg
ctgggcgacgagaacatttccgacgaggagatgcgcgacgtggtgcagcggcttacggcc
tacaatcaggtcaaagtaacgattgcaaataagatacaacgattgattttataa
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