Alistipes shahii: AL1_21920
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Entry
AL1_21920 CDS
T02578
Name
(GenBank) AraC-type DNA-binding domain-containing proteins
KO
K18954
AraC family transcriptional regulator, transcriptional activator of pobA
Organism
ash
Alistipes shahii
Brite
KEGG Orthology (KO) [BR:
ash00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ash03000
]
AL1_21920
Transcription factors [BR:
ash03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AL1_21920
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
ZSWIM1-3_RNaseH-like
Phe_ZIP
Motif
Other DBs
NCBI-ProteinID:
CBK64479
UniProt:
D4ING7
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Position
2480565..2481416
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AA seq
283 aa
AA seq
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MAGGEKRPGIMGECIAANSASEMEIFRFPSRLNALIIGVGTEGETSLTSNLQEFRLKKDS
LFIFSPKHILQVQSNNRFKAHLIVIAPDFLKRINIDTKRMMPLFLQFGSLPCMELTHAES
QSLRSFISMVEQELKGSETDFSSEIIGGLIAATIYKVGDILTHYLTEHPEVDSPIHNRAE
EYFRQFTELLGEHYKHERSVGFYARQLCITPKYLTTLIKRISGKSVSEWIDNYVILEAKT
LLKYSNMSVQEIAYYLNFPNQSFFGSYFKRNAGMSPSQYKAKK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggccggaggcgaaaagcgtccgggaattatgggcgaatgcatcgccgcaaacagcgca
tcggaaatggagatattccggttcccgagccgcctgaacgctctcattatcggcgtcgga
accgaaggcgagacttcactcacgtcaaaccttcaggaattccggctcaaaaaggattcg
ctcttcatcttcagccccaagcacatcctgcaagtacaatccaacaaccgtttcaaggcc
catcttatcgtcatcgccccggattttctcaagcgcatcaacatcgacaccaaacgcatg
atgccgcttttcctgcaattcggctcgctcccctgcatggaactcacgcacgccgagagc
cagtcgctccggagttttatctcgatggtcgaacaggaactgaaaggctccgagacggat
ttttcgagcgagatcatcggcggactgatcgccgcgacgatctacaaggtcggggacatc
ctgacccactacctcacggagcatcccgaggtcgacagcccgatacacaaccgtgcggag
gagtatttcaggcaattcaccgagctgctcggcgaacactacaagcacgaacgcagcgtg
ggattctacgcccggcagctatgcatcacgcccaaatacctcaccacgctcatcaagcgc
atcagcggcaaatcggtatcggaatggatcgacaactacgtgatcctcgaagccaagacg
ctgctcaaatattcgaacatgagcgtgcaggagatcgcctattacctgaatttccccaac
cagtcgttcttcggcagttacttcaaacgcaatgccggcatgtcgccgtcgcagtacaag
gcgaagaagtaa
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