Alistipes shahii: AL1_26180
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Entry
AL1_26180 CDS
T02578
Name
(GenBank) Outer membrane receptor proteins, mostly Fe transport
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
ash
Alistipes shahii
Brite
KEGG Orthology (KO) [BR:
ash00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ash02000
]
AL1_26180
Transporters [BR:
ash02000
]
Other transporters
Pores ion channels [TC:
1
]
AL1_26180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
DUF7382
CooC_C
Big_1
TTR_TEN1-4
EF-hand_6
Motif
Other DBs
NCBI-ProteinID:
CBK64808
UniProt:
D4IPE6
LinkDB
All DBs
Position
complement(3008931..3011999)
Genome browser
AA seq
1022 aa
AA seq
DB search
MSLVAVLILLAAHTAPATAQQKAQTVSGTVLDPDGNPLIGATVVVVKGTQGAVTDVKGKF
TIKAKPSDSLQISYLGYKTETLNVGSRTNFTVRMEKDSSTDIDEIVVIGYGQVAKKDLTG
SVATVKMNDIKDVPVLSVDNALQGRIAGADFMSTTGEPGATTTIRIRGTRSINASNEPLI
VVDGVMDAIHDLNDINSDDIAGISVLKDASSTAIYGSRGANGVILITTKRGLGSKGKVNI
TFKTDMGFSQLPRQLDIMNASEFAQYRNDYAYFGSDANHPDVGKDTPLSGSVYSDPLSLG
EGTNWINEITRTALYSNYALSLSGTSDKSSYYASFSYNDTEGIIQDSGQQRFTGRINLER
QLFKWMKVGYTGSYTWRHNDQNKSSIGGTAWYSSAQYLSPLLKPNDTYNPLYYNGQKINT
QRALIDLNTYYLERHSNNHAFTLKLEPVKNFTINSTFSYYLYQRHTYRYYPGTLPLKGEN
EGGEAYRAEWDEHSFSWETTAGYKFEKNGHSFDVLGGFSAYSFASHDFNLSGKGYMDDAI
LWNNMNAVQDKETYSAGTSYSKKTKTSVYARLNYNWKSRYYLTVTGRYDGASNFAANNKW
AFFPSAALKWNISNENFLKDCNWIDDLSLRLSAGLTGNDAISTYRSLATLSSTTGGYLFD
GSQPVAFYRSRLDSPDLTWEKTTAYNVAIDWSMFKGRLNITAEAYKSKTTDLLMSLAVAA
QTGYTSRWTNIGSTSNKGIELSVESHNIVRPKFHWSTTLTLSHNEQKVDDIGSEDFISAY
NSPGNNPYMMYGYVKGYPLNSLWGFKYGGTWKSAEEREENAVTKTYVSPANTDGGPRYYD
TNHDGVLSREDLIYQGNADPYLYGGLQNTFYIHGFKLGVYFAYSLGGKIYNYSEIYMAGS
QFANQYRYMLNAWHPVRNPNSDIPRAGAKSDAALPSDFMIHDASYLRLKNITLSYTFDLK
KKCSWMKDLTLSVSGENLFLWKKYNGFDPDVSSEGTSSTLRRMDLGAYPKPRTIIFSLQL
RY
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggtggcggtactgatactgctcgcggcgcacacggcgccggcaacggctcaa
caaaaggcccagactgtcagcggaaccgtcctcgacccggacggcaacccgctgatcggc
gccacggtcgtggtcgtcaaaggcacgcagggcgcagtcaccgatgtcaaaggcaaattc
accatcaaggccaagccttcggacagcctccagatttcgtacctgggttacaagaccgag
accctgaacgtgggttcgcggacgaacttcaccgtcaggatggagaaggactcctccacc
gacatcgacgaaatcgtggtcatcggttacggccaggtcgccaaaaaggacctgaccggt
tcggtcgcgacggtcaagatgaacgacatcaaggacgtaccggttctttcggtcgacaac
gcccttcagggacgtatcgccggagccgacttcatgtcgaccaccggtgagccgggcgcc
acgaccaccatccgcatccgcggcacgcgctcgatcaacgcgtcgaacgagccgctgatc
gtcgtcgacggcgtgatggacgccatccacgacctgaacgacatcaactccgacgacatc
gcgggcatatccgtcctcaaggacgcctcctcgacggcgatctacggttcgcgcggcgca
aacggcgtcatcctcatcaccaccaagcggggtctcggctccaagggcaaggtcaacatc
accttcaagaccgacatgggcttctcccagctgccccgtcagctcgacattatgaacgcg
tcggaattcgcgcagtaccgcaacgactacgcctatttcggcagcgacgccaaccacccc
gacgtaggcaaggacacgcccctctccggttcggtctattccgacccgctctcgctgggc
gaagggacgaactggatcaacgagatcacccgcacggccctctattccaactacgccctc
tcgctgtcgggaaccagcgacaaatcgtcgtattacgcttcgttctcctacaacgacacc
gaaggtatcatccaggacagcggccagcagcgtttcacgggacgtatcaacctcgaacgc
cagttgttcaaatggatgaaagtcggctatacgggttcgtacacctggcgtcacaacgac
cagaacaaatcctccatcggcggaacggcctggtacagcagcgcccagtatctgtcaccg
ctgctcaagccgaacgacacgtataacccgctgtattacaacggacagaagatcaacacg
cagcgtgcgctgatcgacctgaacacctattacctcgaacgccactcgaacaaccacgcc
ttcacgctgaaactggagccggtgaagaacttcacgatcaacagcaccttctcctactat
ctctaccagcggcatacctaccgttactatccgggaacccttcccctgaaaggcgagaac
gaaggcggcgaggcctaccgcgccgagtgggacgagcactcgttctcgtgggagaccacg
gccggctacaagttcgagaagaacggccattcgttcgacgttctcggcggtttctcggct
tacagtttcgcctcgcacgatttcaacctgagcggcaaaggctacatggacgacgccatc
ctgtggaacaacatgaacgccgtgcaggacaaagagacctattcggcgggcacttcctac
tcgaagaaaaccaaaacgtcggtctacgcgcgtctgaactacaactggaagtcgcgctat
tacctgaccgtgacgggacgttacgacggagcctcgaacttcgcggccaacaacaagtgg
gcgttcttcccgtcggccgccctcaagtggaacatttcgaacgagaatttcctgaaggac
tgcaactggatcgacgacctgtcgctgcgcctgagcgccggtctgacgggtaacgacgcg
atcagcacctaccgttcgctcgccaccctctcctcgacgacgggcggctatctgttcgac
ggatcgcagcccgtggcgttctaccgcagccgcctggactccccggacctcacgtgggag
aagaccacggcctacaacgtggcgatcgactggtcgatgttcaaaggccgcctgaacatc
acggccgaagcctacaaatccaaaacgaccgacctgctgatgtcgctggccgttgcggcc
caaaccggttacacgtcacgctggaccaacatcggctcgacctcgaacaagggtatcgag
ctgtcggtcgagagccacaacatcgtccgcccgaagttccactggtcgacgacgctcacc
ctgtcgcacaacgaacagaaggtcgacgacatcggttccgaggacttcatttcggcctac
aactcgccgggcaacaacccctacatgatgtacggctacgtcaagggctacccgctcaac
tcgctctggggattcaaatacggcggcacgtggaagagcgccgaggaacgcgaggaaaac
gcggtgacgaaaacctacgtcagcccggccaacaccgacggaggcccgcgctactacgac
accaaccacgacggcgtgctctcgcgcgaagacctgatctaccaaggcaacgccgacccg
tatctgtacggaggtttgcagaacacgttctacatccacggtttcaagctgggcgtctac
ttcgcctactcgctcggcggcaagatctacaactattcggagatctacatggccggttcg
cagttcgctaaccagtaccgctacatgctgaacgcctggcatcccgtccggaacccgaat
tccgacattccgcgggccggagcgaaaagcgacgccgcgcttccgagcgactttatgatc
cacgacgcttcgtacctccggctgaagaacatcacgctgtcgtacacgttcgacctcaag
aaaaaatgctcgtggatgaaagacctcaccctgagcgtatcgggcgaaaacctctttctg
tggaaaaagtacaacggattcgaccccgacgtttccagcgagggaacctcgtcgacgctg
cgccgtatggacctgggcgcctatcccaagccccgcaccatcatattcagccttcagttg
agatactaa
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