Alistipes shahii: AL1_27500
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Entry
AL1_27500 CDS
T02578
Name
(GenBank) Outer membrane cobalamin receptor protein
KO
K02014
iron complex outermembrane recepter protein
Organism
ash
Alistipes shahii
Brite
KEGG Orthology (KO) [BR:
ash00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ash02000
]
AL1_27500
Transporters [BR:
ash02000
]
Other transporters
Pores ion channels [TC:
1
]
AL1_27500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
CBK64897
UniProt:
D4IPN5
LinkDB
All DBs
Position
3168055..3170235
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AA seq
726 aa
AA seq
DB search
MLLFPALLRAQGEPAPSDVPETPQNAGAGEWRGKGAIAIREVPVWGRRPMKSIGVEETKL
DSAILKENIALSIADALTFNTPVFVKQYGRATLSTVSFRGTGPSHTQVTWNGMRINNPML
GMTDFSMIPSYFIDDASLLHGTSSVSETGGGLGGLVKLSTAPAAADGFGLQYIQGIGMFR
TFDEFLRLTWGDERWQVSTRAVYQSSANDYKYRNRDKKENIYDDEMNIVGSYYPTERNKS
GAFDDVHVLQEVYYNTGKGDRFGLNAWYINSNRELPLLTTDYADDTQFENRQREHTLRSV
LSWDHYRRNWKAAAKAGYVHSWTAYDYRRDKGNGILEAMTRSRSRINTLYGQADGEYSVG
GKWLFTAGLSAHQHFVESADKNIIRQQGDKAVVGYDKGRIELDGSLSAKWRPTERLGLSV
VVHEAMYGTSWSPVIPAFFADCLLSRRGNVVAKASVSRNYRFPTLNDLYFLPGGNPGLNS
EKGVAYEAGLSFAVGKEGAYTLSGSASWYDQHIDDWILWLPTAKGFFSPVNIKKVHAYGV
EIRADLAASLTRELKINLNGTFSWAPSINEGGADVPGRPVGRQTAALRTGIFGHGDRKAL
LAQLGPALSVLLLQRTLHHVEQRHHAHRTPYALSDEQPLARKGSLAPVGGPDAQRHGQQP
VQRGVPLGALPAHAAHERRILHRHKAQMGDEKEVIRREGAFLRVLFPFGDQLAGIVHKEG
LALFRG
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgtttccggcgctgctgcgggcgcagggcgagccggcgccgtccgacgtgccg
gaaaccccgcagaacgccggcgcgggggagtggcgcgggaaaggcgccatcgccatccgg
gaggttccggtctggggccggcgtccgatgaaaagcatcggcgtcgaggagacgaaactc
gactcggcgatcctcaaggagaacatcgccctctcgatagccgacgcgctgacgttcaac
acaccggttttcgtcaagcagtacggccgcgcgaccctctccacggtatcgttccgcggc
acgggtccgtcgcatacgcaggtgacgtggaacggcatgcgcatcaacaacccgatgctg
ggcatgaccgacttttcgatgatcccctcctatttcatcgacgacgcctcgctgctccac
ggaacctcgtcggtcagcgagacgggcggcggactgggcggactggtgaagctctcgact
gcgccggcggcggccgacggattcgggctgcaatatatccagggcatcggcatgttccgt
actttcgacgaattcctgcgcctgacatggggcgacgagcgctggcaggtatcaacccgc
gccgtctaccagtcctcggccaacgactacaagtaccgcaaccgcgacaagaaggagaac
atctacgacgacgagatgaacatcgtcgggtcgtactatcccaccgaacgcaacaagagc
ggcgcgttcgacgacgtgcacgtgttgcaggaggtctactacaacaccgggaaaggcgac
cgcttcgggctgaacgcctggtacatcaattccaaccgggaactgcccctgctgacgacc
gactacgccgacgacacgcagttcgaaaaccgccagcgcgaacacaccctgcgcagcgtc
ctctcgtgggaccactaccgccggaactggaaggcggcggcgaaagccggatacgtgcat
tcgtggacggcctacgactaccggcgcgacaagggcaacggcatcctggaggccatgacc
cgttcgcggagcaggatcaacaccctctacgggcaggctgacggagagtattccgtcggc
ggcaaatggctcttcacggccgggctgtcggcacaccagcacttcgtcgaaagcgccgac
aagaacatcatccgccagcagggcgacaaggccgtcgtcggctatgacaagggacgcatc
gaactcgacggctccctgtcggccaagtggcgtcccacggagcggctgggcttgtcggtc
gtcgtgcacgaagccatgtacggaacctcctggtcgccggtcatccctgccttcttcgcc
gactgcctgctttccaggcgcggcaacgtcgtggcgaaggcctccgtctcgcgcaactac
cgcttcccgacgctcaacgacctctacttcctgccgggcggcaaccccggcctgaacagc
gaaaagggcgtcgcttacgaagccggactgtcgttcgccgtgggaaaggagggcgcgtac
acgctgtcggggtcggcgtcgtggtacgaccagcacatcgacgactggattctgtggctg
ccgacggcaaagggatttttctcgccggtgaacatcaaaaaggtccacgcctacggcgtg
gagatccgggccgacctggccgcatcgctcaccagggaactgaaaatcaacctgaacggc
accttctcatgggcgccgtcgatcaacgaggggggagccgatgtccccggccgaccggtc
ggtcggcaaacagctgccctacgaaccggaatattcggccacggcgaccggaaggctctc
ctggcgcagctggggcctgctctatcagttctgctattacagcgaacgctacaccatgtc
gagcaacgacatcacgctcaccggacgccttacgccctatctgatgagcaacctctcgct
cgaaaagggtctctcgctccggtgggcggacctgacgctcaaaggcacggtcaacaacct
gttcaacgaggagtacctctcggtgctctcccggcccatgccgcgcatgaacgccgaatt
cttcatcggcataaagcccaaatgggggacgaaaaagaggtgatccggcgcgaaggagcc
tttctccgcgtcttatttcccttcggggaccagctggccggcatcgttcacaaagaggga
cttgcgctgttcagagggtag
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