Alistipes shahii: AL1_28060
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Entry
AL1_28060 CDS
T02578
Name
(GenBank) tRNA-U20-dihydrouridine synthase
KO
K05540
tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Organism
ash
Alistipes shahii
Brite
KEGG Orthology (KO) [BR:
ash00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ash03016
]
AL1_28060
Transfer RNA biogenesis [BR:
ash03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
AL1_28060
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GFIT
Motif
Pfam:
Dus
DHO_dh
PEP_mutase
Motif
Other DBs
NCBI-ProteinID:
CBK64942
UniProt:
D4IPT0
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Position
3221362..3222384
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AA seq
340 aa
AA seq
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MKIANIELGERALLLAPMEDVTDPSFRYMCKRFGADMVYTEFISSDGLIRDAAKSLKKLE
IDDAERPVGIQIYGHLIDPMVEAARMAEAAGPDVIDINFGCPVKKIAGRGAGSGMMRDVP
LMVEMTRRIVAAVKKPVTVKTRLGWDEESKNIEEIALRLQDVGIAALTIHGRTRAQMYRG
EADWTLIGKVKNNPQIRIPIIGNGDVDSGPKAREMFDRYGVDGVMIGRATYGRPWIFREV
KHYLSTGEALPQPSVAERVAIAKEHLQKSLEIKGDHVGILEMRRHMTNYFKGLPDFKSTR
LKLVTSLDTAELFATLDEIACRWGGYDLSEAVPAPLSHNL
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgcaaatatagaactgggcgaacgcgccctgctgctcgctccgatggaggac
gtgaccgacccgtcgttccgctacatgtgcaaacgcttcggcgccgacatggtctacacc
gagttcatctcgtcggacgggctgatccgcgacgcggcgaaatcgctcaagaaactcgaa
atcgacgacgcggaacgccccgtgggcattcagatatacggccacctgatcgacccgatg
gtcgaggcggcgcgcatggccgaggcggccggtcccgacgtgatcgacatcaatttcggc
tgcccggtgaagaagatcgccggccgcggagccgggtcggggatgatgcgcgacgtgccg
ctgatggtcgagatgacgcgccggatcgtcgcggcggtgaagaagcccgtgacggtgaaa
acccgcctcggatgggacgaggagtcgaaaaacatcgaagagatagccctgcggttgcag
gatgtcggcattgcggccctcaccattcacgggcgcacgcgggcgcagatgtaccgcggc
gaggccgactggacgctgatcggcaaggtgaagaacaacccgcagatacgcattccgatc
atcggcaacggcgacgtcgattcaggtccgaaagcccgcgagatgttcgaccgctacggc
gtggacggcgtgatgatcggccgggcgacctacggccggccgtggatattccgcgaagtg
aagcactacctctcgacgggcgaagcgctgccgcagccgtcggtcgcggaacgcgtggcc
atcgcgaaggaacatttacagaaatcgctcgaaatcaagggtgaccatgtcggaatcctc
gaaatgcggcgtcacatgaccaactatttcaaggggctgcccgacttcaagtccacacgg
ctgaaactcgtgacatcgctcgacaccgccgagctgttcgccacgctcgacgagatcgcc
tgccgctggggcggctacgatttgagcgaagcggttccggcaccgctgtcgcacaacctg
tga
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