Alistipes shahii: AL1_29590
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Entry
AL1_29590 CDS
T02578
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ash
Alistipes shahii
Pathway
ash02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ash00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AL1_29590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ash03021
]
AL1_29590
Transcription machinery [BR:
ash03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AL1_29590
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
Ins_allergen_rp
LysM4_N
Acetate_kinase
Motif
Other DBs
NCBI-ProteinID:
CBK65063
UniProt:
D4IQ51
LinkDB
All DBs
Position
complement(3388208..3388765)
Genome browser
AA seq
185 aa
AA seq
DB search
MDPTDIRYILDDLACNASQEALQELYMLYYKRIARYIGLYVRYDGAVMELTSDVFFAVWE
NRLELPEIRNFNAYIYRIAKFKALNYLRKRNLPTVNLDEMPLDLFARTSTTPEDDCISAE
TVREINRAIESLPPKCKLAFKLVREDRMSHREAAETLYISVKTLEVHLGHAVQKIREALR
KKNIC
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggacccgaccgacatccgttacatcctcgacgacctggcctgcaatgcttcccaggag
gctttgcaggaactttatatgctttattacaagcgtatagcccgttatatcggattgtat
gtccgctatgacggggctgttatggaactgacttccgatgtgttcttcgcggtctgggag
aaccgtcttgaacttcccgaaatccggaatttcaatgcttatatctaccggatcgccaaa
ttcaaggcattgaattatctccggaaacgcaacctgcccaccgtcaatctggacgaaatg
ccgctggaccttttcgcccgcaccagcacgactcccgaggacgactgcatttccgccgag
accgtccgcgagataaaccgtgccatcgagtcgctgccgcccaaatgcaagctggccttc
aaactggtgcgcgaggaccggatgtcgcaccgcgaagcggccgagacgctctatatctcc
gtcaaaacccttgaagtgcacctgggccatgccgtgcagaagatccgcgaggctctgcgc
aagaaaaatatttgctga
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