Alistipes shahii: AL1_31040
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Entry
AL1_31040 CDS
T02578
Name
(GenBank) Secretin and TonB N terminus short domain./TonB-dependent Receptor Plug Domain./TonB dependent receptor.
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
ash
Alistipes shahii
Brite
KEGG Orthology (KO) [BR:
ash00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ash02000
]
AL1_31040
Transporters [BR:
ash02000
]
Other transporters
Pores ion channels [TC:
1
]
AL1_31040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
CarboxypepD_reg
STN
Big_1
CooC_C
Invasin_D3
TTR_TEN1-4
Motif
Other DBs
NCBI-ProteinID:
CBK65189
UniProt:
D4IQH7
LinkDB
All DBs
Position
complement(3571279..3574686)
Genome browser
AA seq
1135 aa
AA seq
DB search
MEQVMNEIERQTKYLFGSAENVDVKRIVTVQVVNRPLQEALDAMLRGTNVSYTVQGSNIV
LKNGRSEAEAKKPAVISGVVRDAAGNPVVGAAVVVKGTTIGISTDSEGRFSLQVPPPASQ
AVLEINYLGYAPADVRVGSATRFDITLKEDSQQISDVLVVGYTPMRKSDFTGSIASVKAS
ELTTTTPTMAQALAGKVAGVEVRQADGAPGEGVQIRVRGVNSLSAGSDPLYVVDGYPASE
DVYINPGDIESIDILKDAASAAIYGSRGASGVVLITTKRGKEGERAKISYDFSYGIQQLE
RKVDLLDANQFRDLYIASRNDSYRRKATAAGIAWSPNDDNTIRSAKGFSLADVGIHPMFY
DFTTRTPVEQQYNTDWQDEVFGNAGMMRHNISVTGGSKAIRYMASVGYMDQDGIIAPSNH
NRINARLNLDAQITKHFSASLSYSMYDVKNKVVQAEGRMINDGVIQSMLMYLPNLPAYEE
NGDYARSAMIRMVTDWGINFPENPLVIANELDISEKTSRHNLNFNLVYEPLPDLKISARL
GQQWYNYRYFYYRPMSIGRNSTPAYGPELASYNIARSSSTYDIDRLGEFTASYKKQLGRH
HVDALIGYTLQRKTYDRLGVQATGFADDRIHEVTAHGPKDSDVSLYETRKAAWSMMSYLA
RLNYSFDDRYTVTGTFRTDGSSRFGVNNRWGYFPSVSAGWTISNEPFLKDALENIATVRI
RASWGKSGNNDIGNYSSIAGISTGSYAFGTTAVSTSRLGGFADSELGWETTTQTNIGLDL
GFFNSRLNVIANYYNSISTDILYNAPISAISGFTSSTTNMTDAKIRNRGFDLQVDARLLT
GKVKWNVSTNISINRNKVVSLGGLDDILSTSERSVQSHITKEGYPIGSFYGYKAVGIMSE
LDYKNALKDREVYLANGSKFPAGYTLQGPAVPSYALDDLSYGNTIWKDVSGDGVIDTNDK
TILGNAYPDFTGGFSTSLSWKGFDLGASFTYSYGGEVINFQDYYLFNVEGSSNQYAIAAD
RYVSDTNPGRNNVPIATRISVTNQSLKLSSYYVEDASYFRCSNITLGYTLPKRLLRKIGV
ESCRVYVSGDNLFTITDYRGYNPEVSYKSSNLMPGFDWGCYPLSRIYSVGLNLTF
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggttatgaatgagattgagcgtcagacgaaatatcttttcggaagcgccgag
aacgtggatgtgaaacgcattgttacggtacaggtcgtgaatcgtccgctgcaggaggcg
cttgacgccatgctccggggaacaaatgtatcctatacggtccagggctcgaacattgta
ctgaagaacggacgctctgaagccgaggcgaagaagcctgctgtgatttccggtgtcgta
cgcgatgcggccggcaacccggttgtcggagcagccgtagtcgtgaaaggtacgacgatt
gggatcagcacggactcagagggccggttttcgctccaggtacccccccccgcttcgcag
gccgttctggaaatcaactatttggggtatgccccggcggatgttcgggtcggcagcgcc
actcgcttcgacattacgctcaaagaggatagccaacaaatctcggatgtgctcgttgtc
ggctatacgcccatgcgcaaaagcgactttacgggctcgatagcgagtgtcaaagccagc
gaactgacgacaacgacgcccaccatggcgcaggcgcttgccggcaaggtcgccggcgtg
gaggtccggcaggccgacggcgcgccgggtgagggcgtgcagatacgtgtgcggggtgtc
aactcgctctcggctggcagcgatccgctgtatgttgtcgacggttatcctgcctcggag
gatgtttacatcaatccgggcgatatcgagagcatcgacattctgaaagatgccgcctcg
gctgcaatctacggttcgcgcggcgcttcgggcgtcgtgctgattacaaccaaacgcggc
aaagagggcgagcgcgccaagatcagctatgatttctcttatggtattcagcagctcgaa
cgtaaggtcgatctgttggatgcgaaccaattccgggacctgtacattgcttcgcgcaac
gattcctatcgccggaaagcgacggccgccggcattgcgtggagtcccaacgacgacaat
acgattcgttcggccaagggattttcgctcgccgatgtcggtatccaccccatgttctac
gattttacgacccggacgcctgtcgaacagcagtacaataccgactggcaggacgaggtg
ttcggcaacgccggaatgatgcgccacaacatttcggtgacgggaggttccaaggctatt
cgctacatggccagcgtcggctacatggatcaggatggtattatcgccccctcgaatcac
aatcgcattaatgcccgtctgaatctcgatgcacagatcaccaagcacttttcggccagc
ctgagctattcgatgtacgacgtcaaaaacaaagtggtacaggcggaagggcgtatgatc
aatgacggtgttattcaaagtatgctcatgtatctgcccaacctgccggcctatgaggag
aacggcgattacgctcgtagcgccatgatccggatggtgacggactggggcatcaatttc
cccgaaaatccgctcgtcatcgccaacgaactggatatttcggagaagacttcgcgccac
aacctgaacttcaacctggtctatgaaccattgcccgatctgaagatctcggcgcgactg
ggacagcagtggtacaactaccgctatttctactaccggccgatgagcataggccgaaac
agcacgcccgcctatgggcccgaactggcctcctacaatatcgcccgctcgagttcgacc
tacgatatcgaccggctcggggagttcacggcaagctacaagaaacagctcggacgccat
cacgtcgatgcgctcatcggctatacgcttcagcgcaagacctacgaccgactcggtgtc
caggctacgggattcgccgacgaccgcatccacgaggtgacagcccacggcccgaaagat
tcggacgtatcgctttatgaaacccgcaaagcggcttggtcgatgatgtcctatctggcg
cgtctgaactattcgttcgacgaccgttacaccgtgaccggaacgttccgcaccgacggt
tcgtcgcgtttcggcgtcaataaccgctggggatatttcccgtcggtatcggcaggctgg
acgatctcgaacgaaccgtttctgaaagatgcgctcgaaaacattgctacggtccgtatc
cgtgccagctggggtaagagcggcaacaacgacatcggcaattattccagcattgcaggt
atctcgaccggaagttatgctttcggcacgacggccgtatccacttcccgtctcggcggg
tttgccgattcggaactcggatgggaaacgacgacgcagaccaacataggtctggacctg
ggatttttcaacagccggttgaatgtgattgccaactattacaactccatctcgaccgac
atcctctataacgcaccgatctccgcgatttccgggttcacctcttcaacgaccaacatg
accgatgcgaagatccgcaaccgtggtttcgacctgcaggtcgacgcccgattgctgacc
ggcaaggtaaagtggaatgtcagcacgaatatttcgatcaaccgtaacaaagtggttagt
ttgggcggactggacgacattctctccacatcggagcgttccgtgcaatcgcatattacc
aaagaaggctatcccattgggtcgttctacggctacaaggccgtcggcatcatgtcggaa
ctcgattacaagaacgcgctgaaggaccgggaggtttatctggccaacggcagcaagttc
cctgccggctacacgctgcaagggcctgccgtacccagctatgcgctcgacgatctgtcc
tacggcaatacgatctggaaagacgtgagcggcgacggcgtcatcgacacgaacgacaaa
acgattttggggaacgcttatcccgactttacgggcggcttctcgaccagcctctcgtgg
aaaggcttcgatctgggagcgagcttcacttactcgtacggcggtgaggtgatcaatttc
caggattactatctgttcaacgtggaaggatcgtcgaaccagtatgcgattgccgccgac
cgttatgtgtcggatacgaatccggggcgcaacaacgtacccatcgccacgcggatctcg
gtgacgaaccaatctctcaaactctcttcgtactatgtggaggacgcctcttatttccgc
tgctcgaacattacgttaggctatacgttgcccaaacgtctgctccggaagatcggggtc
gaatcgtgccgggtatatgtcagcggcgacaacctcttcactattaccgactaccgcggt
tacaaccccgaggtttcgtacaagagcagcaacctgatgcccggattcgactggggttgc
tatccgctgtcgcgtatctactcggtaggtttaaatttaacgttttaa
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