Acinetobacter shaoyimingii: G8E00_00960
Help
Entry
G8E00_00960 CDS
T07106
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
asha
Acinetobacter shaoyimingii
Pathway
asha03410
Base excision repair
asha03430
Mismatch repair
asha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G8E00_00960 (recJ)
03430 Mismatch repair
G8E00_00960 (recJ)
03440 Homologous recombination
G8E00_00960 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asha03400
]
G8E00_00960 (recJ)
DNA repair and recombination proteins [BR:
asha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
G8E00_00960 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
G8E00_00960 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
G8E00_00960 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Toprim
Motif
Other DBs
NCBI-ProteinID:
QIO04626
UniProt:
A0A6G8RRS8
LinkDB
All DBs
Position
201330..203033
Genome browser
AA seq
567 aa
AA seq
DB search
MPKITIQQRPLMTRPENFQGVSPLIAHILARRGVQSEQELELKLKHLLAPKMKGLDQAIQ
IIDEAIDQRKKIVIVGDYDADGATSTALMILALRAMDADVEYLVPDRFKYGYGLTPAIAD
LAFVTYTPDLLITVDNGISSHEGVAQAQAHGMQVIVTDHHLTTKPTPNAEAVVNPNQLGC
EFPSKALAGVGVAFYVLANLSSHRAKLGKSSAKMTQYLDLVALGTYADVASLDYNNRILV
DTGVKRIQQSQCRAGIIALLDIAGRDPSQLKAQDLGFVIGPRINAAGRMETMDIGIECLL
AEDMQTAYTLARQLNDLNLERRHVESEMKQDALKAMEHLQLDQNQLPPALILFEDHWHQG
VIGIVAGRLKEQFHRPSIVFALDKDGEHIKGSARSIEGIHIRDAIEKVAEQHPHLVSFFG
GHAAAAGLTIKKDNFQAFKQAFQALISDMDDELFQATLWTDGELDASDFKVQTVDVLQAL
GPWGQKFPAPIFDGVFKILEYRWLKDVHLKLKLALSNGQMVEAIAFNAADKFNFDESQHS
VRLVYELDKNEYKGNVSLQLRVLHLEQ
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaatcaccattcaacaaagaccactgatgacacgccctgaaaactttcagggc
gtgtctcccttgattgcccatattttggcaaggcgaggtgtacagtcagaacaagaactt
gaattaaagctgaaacatttgcttgcgccgaaaatgaaaggtttggatcaagcgattcaa
atcatagatgaggcgatcgatcaaagaaaaaaaatcgtaattgtcggtgactatgatgcc
gatggggcaaccagtacagccctgatgattttggctttaagagcaatggatgcagatgtt
gaatatttggtgccagatcgatttaagtatgggtatggtctaacacctgcaattgccgat
ttagcatttgtcacctatacgcccgatttactgattactgtagataatggtatttcaagc
catgagggggttgctcaagctcaagcacatggcatgcaagtgattgtgacagatcatcat
ttaacaaccaaacctacaccgaatgcagaagccgtggtgaatcccaatcaattgggttgt
gagtttccaagtaaggctttagctggggtcggtgtcgccttttatgtgttggcaaattta
tcgagtcatcgggcaaaattaggtaaatcttcagccaaaatgacccaatatctagatttg
gtggcattaggtacctatgctgatgttgcaagtttagattataacaaccgcatattggtc
gatactggcgtcaaacggattcaacaaagccaatgtcgggctggaattattgcattatta
gatattgcagggcgtgatccatcgcagctcaaagcacaagatttaggttttgtcattgga
cctcgtatcaatgcagcagggcgtatggaaaccatggacattggcatagaatgtctattg
gcagaggatatgcaaactgcctataccttggctcgtcagctgaacgatttaaatctagaa
cgtcgtcatgttgaatcagaaatgaaacaagatgcgcttaaagccatggagcatttgcaa
ctggatcaaaatcagttgcctcccgcactcattttgtttgaagatcattggcatcagggt
gtgattggcattgtcgctggacgtttaaaagaacagtttcatcgtccaagtattgtgttt
gcactggataaagatggtgagcatatcaaaggttctgcacgttctattgaaggtattcat
attcgagatgcgattgaaaaagtcgcagagcaacatccgcatttggtgagtttttttggt
gggcatgcagctgcggcagggttaaccattaagaaagacaatttccaagcatttaaacag
gcttttcaagcattgatttctgacatggatgatgagctctttcaagcgactttatggaca
gatggtgaactagatgcatccgattttaaagttcaaaccgtagatgtgcttcaagcactc
ggaccttggggacaaaagtttccagcgcctatttttgatggtgtttttaaaattttagaa
taccgatggctcaaagacgttcatttaaagttaaaactggctttgtcgaatggtcaaatg
gttgaagcgattgcttttaatgcagcagataaatttaattttgatgagtctcaacattca
gttcgtttggtctatgagttggataaaaatgaatataaaggcaatgtcagtttgcaactt
cgggtgctacatctagagcaataa
DBGET
integrated database retrieval system
