Acinetobacter shaoyimingii: G8E00_03140
Help
Entry
G8E00_03140 CDS
T07106
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
asha
Acinetobacter shaoyimingii
Brite
KEGG Orthology (KO) [BR:
asha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asha03009
]
G8E00_03140 (rlmD)
Enzymes [BR:
asha01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
G8E00_03140 (rlmD)
Ribosome biogenesis [BR:
asha03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
G8E00_03140 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
PCMT
Methyltransf_25
TRAM
Ubie_methyltran
MTS
TRM5-TYW2_MTfase
Cons_hypoth95
Methyltransf_11
Methyltr_RsmB-F
Methyltransf_23
CMAS
RrnaAD
Methyltransf_15
GCD14
FtsJ
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
QIO05036
UniProt:
A0A6G8RSY5
LinkDB
All DBs
Position
683661..685037
Genome browser
AA seq
458 aa
AA seq
DB search
MKHRASSRPSQLPRSIFKVERLSHEGRGIAHYSADQGHPADKAGKKVFIRYALPGETVEA
QITHQAKKLEEADCIELLGDPNPHRITPVCPHFGICGGCNMQHIQPDEQIRLKQDVLKSH
LEHFAGIQPEQWLAPLRSTREDYRHKARIGVRYLPNKDKLLMGFREAQSNRLTEITTCKI
LDTDLDQALPELRRCLESLKAKSDIGHIELAKGDQEVALLVRHVNKLKHNDVNLLKDFTL
SRGWQLYLQPSNADSLHRVDDTDAPMRLHYRLDEFDVEFGFKPTDFTQVNPTVNPQMVKL
ACELLNLAQGERVLDLFCGLGNFSLPLAREVGRHGQVIAVEGSEDMVKRGTENALKNSIA
NVSFHVQDLTKDFSQHSWANEGFDALLIDPPRAGAEEVMHYVPNFGAKKIVYVSCNPATL
ARDAGILVKNGYQLKKAGVMDMFTHTGHVESIALFEKI
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacatagagcatcatctcgtccatctcagcttccacgatctatttttaaagttgag
agactttcacatgaagggcgagggatagctcactattcagccgatcaagggcatcctgcc
gataaagctggtaaaaaagtctttattcgatatgctttgcctggtgaaacagttgaagcg
cagatcacgcatcaagctaaaaaattagaagaagcagattgtattgaattgctaggtgat
cccaacccgcatcgtattaccccagtatgtccgcattttggtatttgtggtggctgcaat
atgcaacatattcagccagatgaacaaatacgcttaaagcaagatgttttaaaatcacat
ctggaacatttcgcagggattcagccagaacaatggctcgcacccttacgttcaacacgt
gaagattatcgtcataaagcacgtattggggttcgttatctgccgaataaagataagttg
ctgatgggttttcgtgaagcacaaagcaatcgtttaactgaaattaccacctgtaaaatt
ttggatactgaccttgatcaagctttaccagagcttcgtcgatgcttggaaagtcttaaa
gctaagtcagacattggacatatcgagctggccaaaggggatcaagaggttgcgctttta
gtacgacatgtcaacaaactgaagcataatgatgtcaacctattgaaagattttacgtta
agtagagggtggcagttgtatttacaaccttcgaatgctgacagtcttcatcgcgtggat
gatacagatgcacctatgcgattgcactatcgtttagatgagtttgatgtggagtttggt
tttaaaccgacagattttactcaagtgaatccgacagtgaaccctcagatggtcaagctg
gcatgtgaattgcttaatctagcccaaggagaaagggttcttgacctattttgtggtctt
ggaaacttctcacttcctcttgcccgagaagttgggcgtcatggtcaggtaattgcggtt
gaaggtagcgaagacatggtgaagcgcggtacagaaaatgcactgaaaaacagcatcgcc
aatgttagttttcacgtgcaagatttgacgaaagatttttcgcaacattcttgggcaaat
gagggttttgatgcactattaatagaccctcctcgtgctggtgcggaagaagtgatgcat
tatgtgcctaattttggtgctaaaaaaattgtttatgtatcctgtaatcctgctacatta
gcaagagacgccggaatattagttaaaaacggatatcaattaaaaaaagcaggtgtcatg
gacatgtttacccatacgggacatgtcgaatcaattgccttatttgaaaaaatttag
DBGET
integrated database retrieval system
