Actinobacillus suis H91-0380: ASU2_04290
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Entry
ASU2_04290 CDS
T02262
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
asi
Actinobacillus suis H91-0380
Pathway
asi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ASU2_04290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asi03019
]
ASU2_04290
Enzymes [BR:
asi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ASU2_04290
Messenger RNA biogenesis [BR:
asi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ASU2_04290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AFU18996
UniProt:
K0G421
LinkDB
All DBs
Position
complement(938551..939774)
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AA seq
407 aa
AA seq
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MSKHLTEQRFIDFPIHENVIAALDSKGFEFCTPIQAKTLPITLAGNDIAGQAQTGTGKTM
AFLVATFHHLLTNDIQTATNQPRALILAPTRELAVQIGSDAELLVKHSDLKLALAYGGDG
YDKQVQAIEQGVDILVGTTGRVIDYVKQGVINLDKVQVVVLDEADRMFDLGFIKDIRYLM
RKCPKPAQRLTMLFSATLSPRVRELAYEDMNDAQYIEIEPLQRTGHRIKEELFYPSNEDK
MALLLTLLEEEWPDRCMIFANTKHKCEEIWSYLVADGHRVGLLTGDIAQKKRLALLDSFT
KGQLDILVVTDVAARGLHIPEVTHVFNYDLPDDREDYVHRIGRTGRAGESGHSISFACER
YAVNLPAIEEYIGHAIPVSQYDASALLALPKPARVARGPRHSAAKRR
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacatctcaccgaacagcgttttattgattttccgattcatgaaaatgtaatt
gcggcactcgacagtaaaggatttgaattctgtacgcctattcaggcgaaaacgttgccg
attactttagccggcaatgatattgccggacaggcgcaaaccggtacgggtaaaaccatg
gcgtttttggttgcaactttccatcatttattaactaacgatattcaaacagcaactaat
cagcctcgagctttaatcttagcgcccactcgtgagcttgcggtgcaaattggttcggat
gccgagctattggtgaaacattccgatttaaaacttgcgttggcttacggtggagacggt
tatgacaagcaagtgcaagcgattgaacaaggtgtagatattttagtcggcaccaccgga
cgtgtaattgattatgttaaacaaggcgtgatcaatttagataaagtgcaagtggtggtg
ttggacgaggcggatcgtatgttcgatctcggctttattaaagatattcgttatttaatg
cgtaaatgcccgaaaccggcgcaacgcttgaccatgttattttctgcaacactttcgcca
cgtgtgcgagagttggcgtatgaagatatgaatgatgcgcaatatattgaaattgagccg
ttgcaacgtaccggacatcgcattaaagaagaattattttacccttctaatgaagacaaa
atggcgttattgctcaccttattagaagaagagtggccggatcgttgtatgatttttgcc
aacactaaacataaatgtgaagaaatttggagttatttagtggcggatggtcaccgtgtt
gggctgttaaccggtgatattgcacagaaaaaacgtttggcactgttagatagctttacc
aaaggtcagttagatattttagtggtaaccgatgttgctgcccgtggtttgcatattccg
gaagtgacccatgtctttaactatgatttgccggatgatcgtgaagactatgtgcatcgt
atcgggcgtaccggacgtgccggagagagcggtcattcgattagctttgcctgtgagcgt
tacgctgtgaatttaccggcaattgaagaatatatcggccatgcgattccggtgagccaa
tatgacgccagtgcgttattagcgttgccgaagccggctcgagtggctcgaggcccaaga
cattcggcagctaaacgtcgttaa
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