Actinobacillus suis H91-0380: ASU2_05930
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Entry
ASU2_05930 CDS
T02262
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
asi
Actinobacillus suis H91-0380
Pathway
asi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ASU2_05930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asi03019
]
ASU2_05930
03400 DNA repair and recombination proteins [BR:
asi03400
]
ASU2_05930
Enzymes [BR:
asi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ASU2_05930
Messenger RNA biogenesis [BR:
asi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ASU2_05930
DNA repair and recombination proteins [BR:
asi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ASU2_05930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
Helicase_Sgs1
ResIII
HEM4
Motif
Other DBs
NCBI-ProteinID:
AFU19324
LinkDB
All DBs
Position
complement(1314007..1315815)
Genome browser
AA seq
602 aa
AA seq
DB search
MQLSQTAAKDVLNNVFGYQSFRHGQQEVIDSVLAGRDCLVIMTTGGGKSLCYQVPALCLD
GITLVISPLISLMKDQVDQLLTNGIEAGFLNSTQTFEEQQDVEQKALSGQLKLLYLSPEK
VMTQGFFHFISLCKISLIAVDEAHCVSQWGHDFRPEYTLLGNLRNTFPNVPLMALTATAD
PTTRHDILQHLRLTDPHTYLGSFDRPNIRYTVQEKFKPMEQLAKFIGKQQGKSGIVYCNS
RKKVEEITEKLATRKISVMGYHAGMSVQQRETVQNAFQRDNIQVVVATIAFGMGINKSNV
RFVVHFDLPRSIESYYQETGRAGRDDLPSEAVLFYDPADYAWLQKVLLEEPESEQRDIKQ
HKLQAIGAFAESQTCRRLVLLNYFGESRQEPCKNCDICLDPPRKYDGTLDAQKVMSVIYR
TGQTFGAHHVIGVLRGLNNQKIRQFNHDQLSVYGIGKEQSQDYWLSIIRQLIHLGLIRQN
IVNHSALQLTEEARPVLRSEKKLELAMPRLTFSATAYVQKQTSVRYDKDLFARLRFLRKQ
IADKENIPPYVVFNDATLQEMAEFLPLTEVEMLDINGVGERKLERFGGAFLSLIQEHCHN
RK
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgcaattatctcaaactgctgccaaagatgtattaaataacgtcttcggttatcaatct
tttcgtcacggacaacaagaggtgatcgattcagttttggcgggaagagattgccttgtg
attatgactaccggcggcggtaagtcgctttgttatcaagtacctgcactttgcttagat
ggcattacgctagtgatttctccgctgatttctttgatgaaagatcaggtcgatcagctg
cttaccaatggtatcgaagccggttttttaaactccacgcaaacctttgaagagcaacaa
gatgttgagcagaaagcgctttccggtcagctaaaattactttatctctcgccggaaaag
gtgatgacccaaggctttttccattttatttcgctatgcaaaattagcctgattgcggtt
gatgaagcgcattgcgtttcgcagtggggacacgattttcgcccggaatacaccttatta
ggcaatttgcgtaatacgtttccgaatgtgcctcttatggcattaacagcaacggcagac
ccaacaactcgccacgatattctgcagcacctacgcttaaccgatccgcatacttattta
ggtagttttgatcgcccaaatattcgctatacggtacaagaaaaatttaagccgatggag
cagttggcaaagtttatcggtaagcaacagggcaagagcggtatcgtttattgtaatagc
cgtaaaaaggtagaagagattacggagaagcttgcgacacggaaaatttcagtgatgggt
tatcatgccggcatgtcggttcagcaacgtgaaacggttcaaaatgcgtttcagcgagat
aatattcaagttgtggttgcgaccattgcttttggtatgggaattaataaatcgaatgtg
cgttttgtcgtgcatttcgatttgccgcgcagtatcgaatcttactatcaagaaaccggg
cgtgcaggacgtgatgatttaccttctgaagcggtgttattttatgatcctgccgattat
gcgtggctgcaaaaggtgttactggaagaaccggaaagtgaacaacgagatataaaacaa
cataaactacaagccatcggtgcttttgcagaatcgcaaacctgtcgccgtttagtgcta
ttgaattatttcggcgaatcacgtcaagaaccgtgtaaaaactgcgatatctgtttggat
ccaccccgtaaatatgatgggacattggatgcgcaaaaagtgatgtcggtgatttatcgt
accggtcaaacttttggtgcacatcatgtgattggcgtattgcgtggtttgaataatcag
aaaattcgtcagtttaatcatgatcagctttcggtatacggcatcggcaaagagcagagc
caagattattggctaagtattattcgtcaactgattcatcttggtctaattcgtcaaaat
attgttaatcattcagctctacagttaactgaagaagctcgtccggtattgcgttcggag
aaaaagctcgaattagcaatgcctcgtttaacgttttcagcaacggcttatgtacagaaa
caaacttcggttcgctacgataaggacttatttgctcgtctacgttttctgcgtaaacaa
attgccgataaagaaaatatcccaccttatgtggtattcaatgatgcgactttgcaagaa
atggccgaatttttaccgcttacggaagtggaaatgttggatattaatggagttggagaa
cgtaaattagaacgttttggtggtgcttttttaagcttgattcaagaacattgtcataac
cgtaaataa
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