Actinobacillus suis H91-0380: ASU2_09780
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Entry
ASU2_09780 CDS
T02262
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
asi
Actinobacillus suis H91-0380
Pathway
asi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
asi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ASU2_09780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asi03021
]
ASU2_09780
03400 DNA repair and recombination proteins [BR:
asi03400
]
ASU2_09780
Enzymes [BR:
asi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ASU2_09780
Transcription machinery [BR:
asi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ASU2_09780
DNA repair and recombination proteins [BR:
asi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ASU2_09780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AFU20084
UniProt:
K0G8R3
LinkDB
All DBs
Position
2136112..2140383
Genome browser
AA seq
1423 aa
AA seq
DB search
MKDLVKFLKAQSKSNDDFDVIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCA
RIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRDRMGHIELACPVAHIWFLKS
LPSRIGLILDMPLRDIERVLYFESYVVTEPGMTDLEKNQLLTEEQYWEAEERWGDEFEAK
MGAEGIQALLRDMDLEHQCEMMREELQETNSETKRKKITKRLKLLEAFQQSGNKPEWMVM
TVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLVAPDIIVRNEKRML
QESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGP
YLHLHQCGLPKKMALELFRPFIYSKLESRGIASTIKAAKKMVEREEPIVWDILAEVIREH
PILLNRAPTLHRLGIQAFEPLLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLTLEAQLE
ARALMMSTNNVLSPASGDPIIVPSQDVVLGLYYMTREKVNAKGEGMYFLDPREAEKAYRT
GQAELHARVKVRITEHVKNEAGELVAETNLVDTTIGRAILWMIAPKGMPFKVFNQTLGKK
AISKLINESYRRLGLKESVILADQIMYTGFAYAARSGASVGIDDMVIPAQKNEIIRAAEA
EVAEIQEQFNSGLVTAGERYNKVIDIWAAANERVAKAMMENLSTEEVINREGNPEKQASF
NSIFMMADSGARGSAAQIRQLAGMRGLMARPDGSIIETPITANFREGLNVLQYFISTHGA
RKGLADTALKTANSGYLTRRLVDVAQDLVITEDDCGTHEGIVMTPLIEGGDVKEALRDRV
LGRVVAEDVLKPGTEEVLIPRNTLIDEKWCDVIDAESVDVIKVRSVVTCNTDFGVCAKCY
GRDLARGHLINQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASAAAKESSIQVKNAGTIK
LTNAKFVTNKEGKIVLTSRNTELTVIDTFGRTKENYKVPYGAVLSKNDGAEVAVGEVVAN
WDPHTMPVISEVSGRIQFSDIVDGLTVTRQTDELTGLSSIVVQDVGERATAGKDLRPALR
LVDAQGNDILIPGTDVAAQYFLPGKAIVTLDDGAEIEVGEALARIPQESVGTKDITGGLP
RVADLFEARKPKEPAILAEISGIVSFGKETKGKRRLVITPAEGEAFEEMIPKWRQLNVFE
GEMVQRGDVISDGAETPHDILRLRGVHAVTDYIVNEVQEVYRLQGVKINDKHIEVIVRQM
LRKAVITNAYDSEFLEGEQVEVARVKIANRKRAEEGKPLVEFERELLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGFAYHQARAKKRSQQEQAV
AFEAPVTPANVFATDADIEAEFEFVADDATQSLAALLNAGDEE
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttagtaaagtttttaaaagcacaatcgaaatcgaatgatgattttgatgta
attaaaattggtttagcatcaccggataaaatccgttcttggtctttcggtgaagtaaaa
aaaccggaaacaattaactatcgtacctttaaacctgagcgtgatggtcttttctgtgca
cgtatcttcggaccggtaaaagattacgaatgtctttgtggtaaatataaacgcttaaaa
caccgtggtgtaatttgtgaaaaatgtggcgttgaagtaacccaaactaaagtacgtcgt
gaccgtatgggtcatatcgaacttgcgtgtccggttgcgcacatttggttcttaaaatca
cttccgtcccgtatcggtttaatcttagatatgcctttacgtgatatcgaacgtgtactt
tatttcgaatcttatgttgttactgaaccaggtatgactgatttagaaaaaaatcagtta
ttaaccgaagaacaatattgggaagcggaagagcgttggggcgatgagttcgaagcgaaa
atgggtgcggaaggtattcaagcacttttacgtgatatggacttagagcaccaatgtgaa
atgatgcgtgaagagttacaagaaactaactctgaaacaaaacgtaagaaaatcacaaaa
cgcttaaaattattagaagcattccaacaatccggtaacaaaccggagtggatggtaatg
actgtattaccagtgcttccaccggatcttcgtccattagtaccacttgatggtggtcgt
tttgcgacttcagatctgaacgatttatatcgtcgtgtgatcaaccgtaacaaccgttta
aaacgcttattagatttagtagcgccggatatcatcgtacgtaacgaaaaacgtatgtta
caagagtctgttgatgcgttattagataacggtcgtcgtggtcgtgcgattacaggttct
aacaaacgtccattaaaatctcttgcagatatgatcaagggtaaacaaggtcgtttccgt
cagaacttattaggtaaacgtgtagactattcaggtcgttcggtaattaccgtaggtcct
tacttacacctacaccaatgtggtttaccgaaaaaaatggcattggaattattccgtccg
tttatttactctaaattagaatctcgtggtattgcttcaacaatcaaagctgcgaagaaa
atggttgagcgtgaagaaccgatcgtatgggatatccttgcagaagttattcgtgaacac
ccaattttattaaaccgtgcgccaacacttcaccgtttgggtatccaagcgtttgaaccg
ttattaatcgaaggtaaagcaatccagttacacccacttgtttgtgcggcgttcaacgcg
gacttcgatggtgaccaaatggcggtacacgtaccattaacacttgaagcgcaattagaa
gctcgtgcgttaatgatgtcaactaacaacgtactttcaccggcaagtggtgacccgatt
atcgtaccttctcaggacgttgtattaggtctttactacatgacgcgtgagaaagtaaat
gcgaaaggtgaagggatgtacttccttgacccacgtgaagcggaaaaagcataccgtacc
ggtcaagctgaattacacgcacgtgtaaaagttcgtattaccgaacacgtgaaaaacgaa
gcgggtgagttagttgcggaaactaacttagtggataccacaatcggtcgtgcaatctta
tggatgatcgcaccgaaaggtatgccgtttaaagtattcaaccaaacgttaggtaaaaaa
gcgatttcaaaattaatcaatgaaagctaccgtcgtttaggtttaaaagaatctgtcatt
cttgctgaccaaatcatgtataccggtttcgcatacgctgctcgttcaggtgcgtcagtt
ggtatcgatgatatggtaattccggcgcagaaaaatgaaattatccgcgcggcggaagca
gaagttgcagagattcaagagcagtttaactcaggtcttgtaactgcaggcgaacgttat
aacaaagtaatcgatatttgggcggctgcaaacgaacgtgttgcaaaagcaatgatggaa
aacctttcaacggaagaagtcatcaaccgtgaaggtaacccggaaaaacaagcgtcattc
aacagtatctttatgatggctgactcgggtgcgcgtggttctgcagctcagattcgtcag
ttagcgggtatgcgtggtcttatggctcgtccggacggctcgatcatcgaaacaccgatt
accgcgaacttccgtgaaggtctgaacgttcttcagtactttatttcaacccacggtgca
cgtaaaggtcttgcggataccgcattaaagacagcgaactcaggttacttaacacgtcgt
ttagtagacgtagcacaagacttagtaatcactgaagatgactgtggtacacacgaaggt
atcgtgatgactccgttaatcgaaggtggtgacgttaaagaagcattacgtgatcgtgta
ttaggtcgtgtggttgcagaagacgtattaaaaccaggtacggaagaagtattaattcca
cgtaacaccttaatcgatgagaaatggtgtgatgtgattgatgcggaatctgtagacgta
atcaaagtacgttcggtggtaacttgtaacacagacttcggtgtgtgtgcgaaatgttac
ggtcgtgaccttgctcgtggtcaccttatcaaccaaggtgaagcagtgggtgttattgcg
gcacaatcaatcggtgaaccaggtacacagttaaccatgcgtacgttccacatcggtggt
gcggcttctgcggcagcaaaagaatctagcatccaagtgaaaaacgcaggtacgattaag
ttaactaacgctaaatttgtaactaacaaagaaggcaaaatcgtattaacttcacgtaac
acagaattaaccgtaatcgacacattcggccgtaccaaagaaaactataaagtaccttac
ggtgcagtgctttctaaaaacgacggtgcagaagttgcagtaggtgaagtagttgcgaac
tgggatccgcatacaatgccggtcatctcagaggtaagcggtcgcatccaattcagcgac
atcgtagatggcttaaccgttactcgtcaaaccgacgaattaaccggtttatcctctatc
gtggtacaagatgtgggtgaacgtgcaacagcaggtaaagatttacgtccggcattacgt
ttagttgatgcgcaaggtaacgacatcttaatccctggcacagatgttgcagcacaatac
ttcttaccaggtaaagcaatcgtaaccttagatgacggtgcggaaatcgaagtcggtgaa
gcattagcacgtattccgcaagaatctgtgggtacgaaagatattaccggtggtcttcca
cgcgtagcagacttattcgaagcacgtaaaccgaaagagccggcaattcttgctgaaatt
tcaggtatcgtgtcattcggtaaagaaactaaaggtaaacgtcgtttagtgatcacgccg
gcagaaggcgaagcattcgaagaaatgattccaaaatggcgtcagctcaacgtattcgaa
ggcgagatggtacaacgtggtgacgtaatctctgatggtgcagaaactccgcacgacatc
ttacgtttacgtggcgttcacgctgtaacagattacatcgtaaacgaagtacaagaagtt
taccgcttacaaggggtaaaaattaacgataaacacatcgaagttatcgttcgccaaatg
ttacgtaaagcggttatcaccaacgcatacgacagcgaattcctcgaaggggaacaagtt
gaagtggctcgcgtgaaaattgctaaccgtaaacgtgcagaagaaggcaaacctcttgtt
gagttcgagcgtgaattgcttggtattaccaaagcgtcgcttgcaactgagtcatttatc
tcagcagcgtcgttccaagaaacaacacgtgttcttactgaagcggcagtggcaggtaaa
cgtgacgaattacgcggcttgaaagagaacgtaatcgtaggtcgtttaatcccagctggt
acaggtttcgcataccaccaagcacgtgcgaaaaaacgtagccaacaagaacaagcggtt
gctttcgaagcaccagttacaccggctaacgtattcgcaacagatgctgatatcgaagca
gaattcgaattcgttgcagacgatgcaactcaaagcctagcagcgttattaaacgcaggt
gatgaagagtaa
DBGET
integrated database retrieval system
