Actinobacillus suis H91-0380: ASU2_10460
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Entry
ASU2_10460 CDS
T02262
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
asi
Actinobacillus suis H91-0380
Pathway
asi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ASU2_10460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asi03019
]
ASU2_10460
03009 Ribosome biogenesis [BR:
asi03009
]
ASU2_10460
Enzymes [BR:
asi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
ASU2_10460
Messenger RNA biogenesis [BR:
asi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ASU2_10460
Ribosome biogenesis [BR:
asi03009
]
Prokaryotic type
rRNA processing factors
ASU2_10460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
PNPase_C
MCR_alpha
zf-C2HC_3
Motif
Other DBs
NCBI-ProteinID:
AFU20220
UniProt:
K0GEU9
LinkDB
All DBs
Position
2292036..2295092
Genome browser
AA seq
1018 aa
AA seq
DB search
MLINATQKEELRVALVDGQRLFDLDIESPGHEQKKSNIYKGKITRVEPSLEAAFVDYGAE
RHGFLPLKEISREYFPADYVFNGRPNIKDIIKEGQEVIVQVSKEERGNKGAALTTFISLA
GSYLVLMPNNPRAGGISRRIEGDERLELKEALDCLDVPEDVGLIVRTAGVGKSPEELQWD
LKVLLHHWEAIKKAAESRPAPFLIHQESDVIVRAIRDYLRRDIGEILIDNKKIFEKAKNH
IRLVRPDFINRVRLYEGEVPLFSHYQIESQIESAFQREVRLPSGGSIVIDVTEALTAIDI
NSSRSTRGGDIEETALNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQREVENRIR
EATRQDRARIQFGRISRFGLLEMSRQRLSPSLSEASSHVCPRCQGTGKVRDNESIALSIL
RLLEEEAIKENTAQVHTIVPVQIASYLLNEKRKAISSIEKRHDVQVVVVPTESMETPHFS
VYRLRENEVLPTLSYDLAKHYHAREEDTQPNTHTVSEEALVTRNEPVITVESVLQSSELN
LQPAPTPVAPAKPSLLSRLIAKVKSLFATEEKVEEKPKPKARNQRERRNRRERPNRAERQ
ERKQQQQDEQKAQRQERNQERAESKKARRQVVEEVAGAPETQTEQAQRPQRENQVAERRQ
RRDLRKKVRVEANDNNAIEANQAAVNPVVAKAAPEKAVAEAKPQAFVSPEVISAVTESKP
SDESVKAAVQDSSSDVVAEERTEQRENNRQRRLPRHLRVGNQRRRENNRREHSAVAAMPL
AAAVASLEMASGKIWVKFSNQPVATKAAPKVEEKPRFLSVDEMLEQQQEPEVVPTAPTVE
KSVNSAAPFGAFVTQHSDRDLVKENKERAQHIVSDEPKEDAQLVEKAMAKHVAPLGGFVS
QHTDRDLVKEKNERVQKHQAQATSAPALESVSTEEIVAPVSSYESSYSFSGHLGTFSRVQ
HTKAAMTVASAPAEMPAEANVTEWTQSKYYFHGKGFGGHSSAVSHVHSAPRIAGAEVE
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgttaatcaatgcaactcaaaaagaagagttgcgcgttgcactcgttgacgggcaacgt
ttattcgatttagatatcgaaagcccgggacacgaacaaaaaaaatcaaatatctacaaa
gggaaaattacccgtgttgaaccaagccttgaagctgcattcgttgattatggtgcagag
cgtcatggtttccttcctttaaaagaaatctctcgtgaatacttccctgcggattatgta
ttcaacggtcgcccgaatatcaaagatattatcaaagaaggacaagaagtgattgtccaa
gtgagtaaagaagaacgtggtaacaaaggtgctgcgctgacgacttttatctcacttgcc
ggtagctatttagtattaatgccgaataacccgcgtgcaggcggtatttctcgccgtatt
gaaggtgatgaacgcttagaattaaaagaagcgttagattgcttagatgtgccggaagac
gttggtttaatcgtgcgtaccgccggtgtaggcaagtcaccggaagagcttcaatgggac
ttaaaagtgcttttacaccattgggaagcgatcaaaaaagcggcggaatctcgtccggct
ccattccttatccatcaagaaagtgacgtgattgttcgtgcgatccgtgattatcttcgt
cgcgatatcggcgaaattttaattgataacaaaaaaatcttcgaaaaagcgaaaaaccat
attcgtttagtgcgtccagatttcatcaatcgtgtgcgtttatatgaaggtgaagtaccg
ttattcagccattatcaaatcgaatcacaaatcgaatcggcgttccaacgtgaagtgcgt
ttaccgtcaggtggttcaatcgttattgacgtaaccgaagcgttaacggcgattgatatt
aactcatcacgctcaacccgtggcggcgatatcgaagaaaccgcactaaataccaactta
gaagcggcggatgaaattgcacgtcaattacgtttacgtgacttaggcggtttgattgta
atcgattttattgatatgaccccggtgcgtcatcaacgcgaagtagaaaaccgtatccgt
gaagcgacacgccaagaccgcgcgcgtattcaattcggtcgtatttcacgttttggcttg
ttagaaatgagccgtcagcgtttaagtccgtcactaagcgaagcatcaagccatgtatgt
cctcgctgccaaggtacgggtaaagtgcgtgataacgaatcgattgcactttcgatttta
cgtttattagaagaagaggcgatcaaagaaaataccgcccaagttcatactattgtgccg
gtgcaaattgcgtcttacttactcaatgaaaaacgtaaagcgatctcaagtattgaaaaa
cgccatgatgtacaagtggtggttgtgccgacagaaagcatggaaaccccgcatttcagc
gtatatcgtttacgtgaaaatgaagtgttaccaacacttagctacgatttagcgaagcac
taccatgctcgtgaagaagatactcaaccgaatacacatacagtttcggaagaagcgtta
gtgacacgtaatgaaccggtgattaccgtagaatcagtgttacaaagttctgagttaaat
cttcaacctgcaccgacaccggtagcaccggcaaaaccttcactcctaagtcgcttaatt
gcaaaagtgaaaagcttatttgcaacggaagaaaaagttgaagaaaaaccgaagccgaag
gctcgtaaccaacgtgagcgccgtaaccgtcgtgagcgtccaaatcgtgcagaacgccaa
gagcgtaaacagcaacaacaagacgagcaaaaggcacagcgtcaggaacgtaaccaagag
cgtgcggaatcgaagaaagctcgccgccaagtggttgaagaagttgcaggcgctccagaa
actcaaacggaacaagcacaacgtccgcaacgtgaaaatcaagtagcggaacgccgccaa
cgtcgtgacttacgtaaaaaagtacgtgttgaagcgaatgacaacaacgctattgaagca
aaccaagcagcggtaaatccggttgtagcaaaagctgctcctgaaaaagccgtagcggaa
gcgaagcctcaagcatttgtgagtccggaagtgatttcagctgtaacggagagcaaaccg
tcagacgaaagtgtgaaagctgctgtgcaagacagcagttcggatgttgttgcggaagaa
cgtacggagcagcgtgaaaataatcgccaacgtcgtttacctcgtcatttacgtgtgggt
aatcagcgtcgccgtgaaaataaccgccgtgaacattctgcggtagcagcaatgccttta
gctgcagcggttgcttctctggaaatggcaagcggtaagatttgggtgaaatttagcaac
caaccagtggctacaaaagctgcaccgaaggtagaagagaaaccgcgtttcttatctgta
gatgaaatgttagagcaacaacaagagccggaagttgtaccaacagcgccaaccgttgag
aaaagcgtgaactctgcagcaccttttggcgcttttgttacccagcattctgatcgtgat
ttagtgaaagaaaacaaagaacgtgcgcagcatattgtatctgatgagccgaaagaagat
gcgcagttggtggaaaaagcaatggcaaaacacgttgcgccactaggtggttttgtttct
caacatactgatcgtgatttagtaaaagagaaaaatgaacgtgtacagaaacaccaagcg
caagcaacttctgcaccggcacttgaaagtgtaagcacagaagagattgttgctccggta
tcaagctatgaaagtagctatagtttctctggtcatttaggtacattctctcgtgtacaa
catacaaaagctgcgatgacggtggcatcagcaccggcagaaatgcctgccgaagcaaat
gtcacggagtggactcagtcaaaatattacttccatggtaaaggttttggtggtcattcc
agtgcggtaagccatgtacattcagcaccacgtattgcaggtgcagaagtggaataa
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