Actinoplanes sichuanensis: Q0Z83_084860
Help
Entry
Q0Z83_084860 CDS
T09497
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
asic
Actinoplanes sichuanensis
Brite
KEGG Orthology (KO) [BR:
asic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asic03032
]
Q0Z83_084860 (topA)
03400 DNA repair and recombination proteins [BR:
asic03400
]
Q0Z83_084860 (topA)
Enzymes [BR:
asic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Q0Z83_084860 (topA)
DNA replication proteins [BR:
asic03032
]
Prokaryotic type
DNA Topoisomerases
Q0Z83_084860 (topA)
DNA repair and recombination proteins [BR:
asic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Q0Z83_084860 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
MarR_2
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
BEL10295
LinkDB
All DBs
Position
complement(9158480..9161287)
Genome browser
AA seq
935 aa
AA seq
DB search
MPSDTRTTRLVIVESPSKAKTIAGYLGPDYLVEASVGHIRDLPRNADEVPEEFKGQPWAR
LGVDVDNGFHALYVISESRKQQVAKLKRLAKEVDEIFLATDEDREGEAIAWHLIETIKPK
VPFKRMVFHEITKPAIQAAVANPRDIDRSLVDAQEARRILDRLYGYEVSPVLWKKVMRGL
SAGRVQSVATRIVVERERQRMAFRSAEYWDILAHLAVQGQVEGPRAFNATLIALNGDRIA
TGKDFEPTTGQLKAGSTAVQLDGDGARGLAARLENRPFQVTRVEEKPYRRRPYAPFITST
LQQEAARKMRYSSQQTMRTAQSLYEKGYITYMRTDSVNLSETAVAAARRQIAELYGPSNV
PPQPRKYTTKAKGAQEAHEAIRPAGDNFRTPGEVANELSSDEFRLYELIWRRTIASQMTD
AVGNSISVRIRATTAGGEEADFAASGKTITDPGFLRAYVESSDDENAESDDAERRLPNLV
KDQPLTADQLNATGHNTTPPARYTEASLVKALEELGIGRPSTYSSIMQTIQDRGYVEKRG
QAMIPSFLAFAVIGLLEGHYPRLVDYNFTAAMEGQLDDIAAGDGTQLAFLSSFYFGSQEA
GADDDIAKAGGLKKMVTENLSAIDAREVNSIPLFVDQENRRVVVRVGKFGPYLQRKAVDG
GEDAPEDKASLPEGVAPDELTPERVEELFLAGNGDRVLGDDPATGDEVTVKSGRFGPYVS
AGERKSSLFKSQSPQTLTLEQALDLLKLPRIVGKDAEGNEIVARNGKFGPYISREKDSRS
LGSEDQLLTITLEEALALLAQPKTRQARTAKPPLRELGPDPVSDKPLVIKEGRFGAYVTD
GEFNATLRRDQKPEEITLAEASQMIADKRAKGPVVKKTAAKKAPAKKAAPKADGEATPAK
KAPAKRAAPAKKTTAAKKAAPAKKAAPRKAATAAE
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
gtgccgagtgacaccaggacgacccgtctggtcatcgtcgagtccccgtcgaaggccaag
acgatcgccggttacctgggccccgactatctggtcgaggcctccgtcggccatatccgc
gatctgccgcgtaacgccgacgaggtccccgaggagttcaagggccagccgtgggcacgg
ctcggcgtcgacgtcgacaacggcttccacgccctctatgtgatctccgagagtcgcaaa
cagcaggtggccaagctgaagcggctcgccaaggaggtcgacgagatcttcctcgccacc
gatgaggaccgcgagggcgaggccatcgcgtggcacctgatcgagacgatcaagcccaag
gtcccgttcaagcggatggtcttccacgagatcaccaagccggccatccaggccgcggtg
gccaacccccgtgacatcgacaggtctctggtggatgcccaggaggcgcgccgcatcctg
gaccggctgtacggctacgaggtcagcccggtcctgtggaagaaggtgatgcgcggcctg
tccgcgggtcgcgtgcagtcggtcgccacccggatcgtcgtcgagcgcgagcgccagcgg
atggcgttccgctccgccgagtactgggacatcctggcccacctggccgtccaggggcag
gtcgagggcccgcgtgcgttcaacgccacgctgatcgcgctgaacggtgaccggatcgcc
accggcaaggacttcgagcccaccaccgggcagctcaaggccggttccaccgcggtgcag
ctggacggtgacggcgcccgcgggctggccgcccgtctggagaacaggccgttccaggtc
acccgggtcgaggagaagccgtaccgtcgtcggccgtacgcgccgttcatcacctccacg
ctccagcaggaggcggcccgcaagatgcggtactcctcgcagcagacgatgcgcaccgcg
cagagcctgtacgagaagggctacatcacctacatgcgtacggactcggtgaacctctcc
gagaccgcggtggccgccgcccgccggcagatcgccgagctgtacgggccgagtaacgtg
ccgccgcagccgcgcaagtacaccaccaaggccaagggcgcccaggaggcgcacgaggcg
atccgcccggccggggacaacttccgcaccccgggcgaggtggcgaacgagctgagcagc
gacgagttccggctctacgagctgatctggcgccggaccatcgcctcgcagatgaccgac
gcggtcggtaactcgatcagtgtccggatccgcgcgaccaccgccggcggtgaggaggcc
gacttcgccgcctccggcaagacgatcaccgacccgggcttcctgcgggcctatgtggag
tcctcggacgacgagaacgccgagtccgacgacgccgagcgccgcctgccgaacctggtg
aaggaccagccgctgaccgccgaccagctgaacgcgaccggtcacaacaccacgcccccg
gcccggtacaccgaggcgtcgctggtgaaggcgctggaggagctcggcatcggccgcccc
tccacgtactcgtcgatcatgcagaccattcaggaccgcggctacgtggagaaacgtggc
caggcgatgatcccgtcgttcctggcgttcgcggtgatcggcctgctggagggccactac
ccgcggctggtggactacaacttcaccgcggcgatggagggccagctcgacgacatcgcg
gccggtgacggcactcagctcgccttcctgtcgtccttctacttcggcagccaggaggcc
ggggcggacgacgacatcgccaaggcgggcggcctgaagaagatggtcaccgagaacctc
agcgcgatcgacgcccgcgaggtcaactcgatcccgctcttcgtcgaccaggaaaatcgc
cgggtcgtcgtacgggtcggcaagttcggcccctacctgcagcgtaaggcggtcgacggc
ggcgaggacgcgcccgaggacaaggcgtcgctcccggagggggtggctcccgacgagctg
accccggaacgggtcgaggagctgttcctggccggcaacggcgaccgggtcctcggtgac
gatcccgccaccggcgacgaggtcaccgtcaagtcgggccgcttcgggccgtacgtgtcg
gccggtgagcgcaagtcgtcactgttcaagagccagtcgccgcagacgctcaccctggag
caggcgctcgacctgctgaagctgcctcggatcgtcggcaaggacgccgagggcaacgag
atcgtggcccggaacggcaagttcgggccgtacatctcccgggagaaggactcgcggtcc
ctcggcagcgaggaccagctgctcacgatcaccctggaggaggcgctggctctgctggcg
cagccgaagacccgccaggcccggaccgcgaagccgccgctgcgtgagctcggtcccgac
ccggtcagcgataaaccgctggtgatcaaggagggccggttcggggcctacgtcaccgac
ggggagttcaacgcgacgctgcggcgcgaccagaagccggaggagatcactctggccgag
gcgtcccagatgatcgccgacaagcgcgccaagggtccggtggtgaagaagaccgccgcg
aagaaggccccggccaagaaggcggccccgaaggccgacggcgaggcgaccccggccaag
aaggcacccgccaagcgggctgccccggccaagaagacgaccgccgccaagaaggccgcc
ccggccaagaaggcggccccgcgtaaggcggcgaccgccgccgagtga
DBGET
integrated database retrieval system
