Aeromonas simiae: FE240_01660
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Entry
FE240_01660 CDS
T07073
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
asim
Aeromonas simiae
Brite
KEGG Orthology (KO) [BR:
asim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asim03009
]
FE240_01660 (rlmD)
Enzymes [BR:
asim01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
FE240_01660 (rlmD)
Ribosome biogenesis [BR:
asim03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FE240_01660 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
Cons_hypoth95
MTS
Methyltransf_11
TRM5-TYW2_MTfase
PrmA
Methyltransf_15
PCMT
Methyltransf_12
UPF0020
Methyltransf_32
N6_N4_Mtase
FtsJ
TPMT
RsmJ
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
QFI53526
UniProt:
A0A5J6WQY8
LinkDB
All DBs
Position
351837..353177
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AA seq
446 aa
AA seq
DB search
MSAVGEQQRIQILELTDKGDGIGRLDAVPLYVEGALPGEEVEVTLTLVKPNYLHGRLDKV
VTASPDRVADFCAHSECGGCQVRPLAYPAQLEYKRELVRRALTQQGLVVEVEPVLGMQSP
FAWRNKAQFAVRATDEGAEIGFYRKHSHDLVACDDCAVQDPLHGELLARLRHWMREHEVR
PYDEANHEGDLRHVMTRKGFASGEWMLVLVTRTEQLPAEAELLAALEGLPITTVVHNIHP
EPGNRVLGLTNRVLSGEGIITDRLHDLEFVISPLSFYQVNPVQTDTLYGKALEFAGLTGS
ETVFDLYCGIGTISLFLARQAARVVGIELVPEAIEDARRNAERNGIGNTEFHVGKAEEKV
AELYHAGERADVVVIDPPRKGCDKALLDTLVAMAPERLVYVSCHPQSLARDLAWLTARGF
VLEAVQPVDMFPHTLHVEAVARLRRA
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagtcggagagcagcagcgcatccagatcctcgagttgaccgacaagggggat
ggcataggccggcttgatgcagtgccgctctatgttgaaggcgcgctccccggtgaagag
gtggaggtgacgctcactctggtcaagcccaactacctgcatgggcgtctcgacaaggtg
gtgaccgcgagcccggatcgggttgccgatttctgcgcccatagcgagtgtggcggctgt
caggtgcgcccgctggcctacccggcccagctcgaatataagcgagagctggtacgccgc
gccctgacccagcaggggctggtggtggaggttgagccggtgctcggcatgcagagcccg
tttgcttggcgtaacaaggcgcagttcgcggtgcgtgccaccgacgaaggggccgagatc
ggtttttatcgcaagcactcccatgacctggtcgcctgtgacgactgtgcagtgcaagat
cccctgcacggtgaactgttggcccgtctgcgccactggatgcgcgagcacgaagtgcgt
ccctatgatgaggccaatcatgagggcgatctgcgccacgtgatgacccgcaaggggttt
gccagcggggagtggatgctggtgctggtgacccgcaccgagcagttgccggccgaggcc
gagctgctggccgccctggaagggctgcccatcaccacagtggtacacaatattcacccc
gagccgggcaaccgggtactggggctgactaaccgggtgctgagtggggaggggatcatc
acggatcggctgcatgacctcgagtttgtcatctcgccactctcgttttatcaggtgaac
ccggttcagaccgacacgctgtacggcaaggcgctggagtttgcgggcctcaccggcagc
gagaccgtgtttgatctctactgcggcatcggcaccatctctctgtttttggcgcgtcag
gcggctcgggtggtcggcatcgagttggtgcctgaggctatcgaagatgcccgccgtaac
gccgagcgcaacggcatcggcaataccgaattccacgtggggaaggccgaagagaaggtt
gctgagctctatcatgccggtgagcgtgccgacgtggtggtgatcgatccgccgcgcaag
ggatgtgataaggccttgctcgacaccttggtcgccatggcgccggaacggctggtctat
gtctcctgtcatccccagagtctggcgcgggatctggcctggctcaccgctcgcggcttc
gtgctggaggccgtgcagccggtcgacatgttcccccacaccctgcacgtagaggcggta
gcccggctacgccgtgcttga
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