Aeromonas simiae: FE240_03095
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Entry
FE240_03095 CDS
T07073
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
asim
Aeromonas simiae
Pathway
asim03030
DNA replication
asim03430
Mismatch repair
asim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FE240_03095 (holA)
03430 Mismatch repair
FE240_03095 (holA)
03440 Homologous recombination
FE240_03095 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asim03032
]
FE240_03095 (holA)
03400 DNA repair and recombination proteins [BR:
asim03400
]
FE240_03095 (holA)
Enzymes [BR:
asim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FE240_03095 (holA)
DNA replication proteins [BR:
asim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FE240_03095 (holA)
DNA repair and recombination proteins [BR:
asim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FE240_03095 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Syd
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
QFI53779
UniProt:
A0A5J6WRN8
LinkDB
All DBs
Position
complement(651058..652092)
Genome browser
AA seq
344 aa
AA seq
DB search
MRIFPEQLDDHLRAGLRPCYLVFGDEPLLKLEAIDAIRRVARERGFDERHSFTVEPGLDW
NQVYDACQALSLFSSRQVIELELPAKVDKDLAGRITEISQQLHPDLLLVLSGARLTAAQT
KAVWFSKLEKQGTWVPTNHPEPRFFPRWMAARFQRFGLKAQPDAVNFMCHSYEGNLLAAS
QEIEKLTLLSPPQPITVAYLQETITRHAHFTPFQLIDTLLEGKVNRAQRILAALRAEGTE
PGQLAWTLARELEQLETLALARQSGQPLGEHFSRLRIWQSRQQLITLALNRLPLAKIVQL
WSLMAALDESLRRFDHPKAWQQLAALCLGFRDAAPLPLLPEPLC
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcggatctttcccgaacagttggatgaccacttgagagcagggcttaggccctgctat
ctcgtttttggcgacgagcctttgctcaaactcgaggcgatcgacgccatccgccgggtg
gcccgcgagcgcggtttcgatgaacgccacagcttcaccgtcgagccggggctggactgg
aatcaggtctatgacgcctgtcaggccctttcgctcttctccagccggcaggtgatcgag
ctggagctgcccgccaaggtggacaaggatctggccggacgcatcaccgagatcagccag
cagctccaccccgacctgctgctggtgctgtcgggggcgcgcctcaccgcggcccagacc
aaggccgtctggtttagcaagctggaaaagcagggcacctgggttcccaccaaccacccc
gagccgcgcttcttcccgcgctggatggctgcgcgctttcagcgcttcggtctcaaggcc
caacccgacgccgtcaacttcatgtgccacagctacgagggcaacctgctggccgccagc
caagagatcgaaaagctgaccttgctctcgccgccccagcccatcacggtcgcctacctg
caagagaccatcacccgccacgcccacttcaccccgttccagctcatcgacaccctgctg
gagggcaaggtgaaccgggcccagcgcatcctggccgccctgcgtgccgaaggcaccgag
ccgggccagttggcctggaccttggcccgcgagctggagcagttagagactctggcgctg
gcccgccagagcgggcagccgctgggggagcacttcagccggctgcgaatctggcagagc
cgccagcaactcatcaccttggcgctcaaccgcctgccgctcgccaagatagtgcaactg
tggagcctgatggccgcactcgacgagagcctgcgccgcttcgatcaccccaaggcttgg
caacaactggccgccctctgcctcggttttcgtgacgccgccccattgccactgctgccg
gagcccctatgctag
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