KEGG   Aeromonas simiae: FE240_03900
Entry
FE240_03900       CDS       T07073                                 
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
asim  Aeromonas simiae
Brite
KEGG Orthology (KO) [BR:asim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:asim03016]
    FE240_03900 (thpR)
Enzymes [BR:asim01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     FE240_03900 (thpR)
Transfer RNA biogenesis [BR:asim03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    FE240_03900 (thpR)
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2
Other DBs
NCBI-ProteinID: QFI53914
UniProt: A0A5J6WUI6
LinkDB
Position
complement(815446..815967)
AA seq 173 aa
MARLFFALPVSLLADPIVAWRAARPWPGVPVPAANLHLTLAFLGEVTAQQRTQLEAIAAR
LHCPPLTIPLERCGWFGRAKAAWIGPERWPNELSVLVRELQRHCTRLGLGNGELHYRPHI
TLSRKAAAAPEPAPAPDFVLHADSFCLYQSVSSEEGVRYEPLACWPLRKRVTA
NT seq 522 nt   +upstreamnt  +downstreamnt
ttggcccgactgttttttgcccttccggtcagcctgctggccgaccccatcgtggcgtgg
cgcgccgcccgcccctggcccggcgtgccggtgccggcggccaacttgcacctcaccctg
gcctttctcggcgaggtgacggcgcagcagcgaacacagcttgaggcgatcgcggcccgg
ctgcactgtccgccactgaccatccccctcgagcgttgtggctggtttggtcgcgccaag
gcggcttggatcggccccgagcgctggcccaacgagctgtcggtgttggtgcgcgagcta
caacgccactgcacccgcctcggccttggcaacggcgagctgcactaccgcccccacatc
accctgtcgcgcaaggccgcggcggcgccagagcccgcaccggcccccgatttcgtccta
catgccgacagcttctgtctctatcagtcggtcagcagtgaggagggggtacgttatgag
cccctcgcctgctggccacttcgcaaacgagtgactgcatga

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