Aeromonas simiae: FE240_05980
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Entry
FE240_05980 CDS
T07073
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
asim
Aeromonas simiae
Pathway
asim02020
Two-component system
asim02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
asim00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FE240_05980
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FE240_05980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asim03021
]
FE240_05980
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
asim02035
]
FE240_05980
Transcription machinery [BR:
asim03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FE240_05980
Bacterial motility proteins [BR:
asim02035
]
Flagellar system
Flagellar assembly proteins
Stator
FE240_05980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
GerE
Motif
Other DBs
NCBI-ProteinID:
QFI54281
UniProt:
A0A5J6WVN6
LinkDB
All DBs
Position
1268999..1269715
Genome browser
AA seq
238 aa
AA seq
DB search
MNKAQAYLRHQDSYALVERHAPLVKRIAQHLLARLPSSVLLDDLVQAGMIGLIEASRNFD
GSKGASFETYAGIRIRGAMLDEIRRGDWVPRSVHRNSRMIAEAIDKVEKQHGRDARDTEV
ASQLGVSLHEYHSMLQDVSCGKIIGIEDLGVSEDVIGGEGACERHGYEELASDRFQIALA
ENISRLPEREALVLSLYYDEELNLREIGEILNVSESRVSQIHSQAMHRLRARLRDWQV
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagcccaagcctatcttcgccatcaggactcttatgcgctggtcgagcggcac
gctcccttggtcaagcggattgctcaacatttgctggcacgtttgcccagtagtgtattg
ctcgatgatttggttcaggcggggatgattgggcttatcgaggcgtcccgtaattttgat
ggcagcaagggggcaagcttcgagacctatgccgggatccgtatccgcggtgccatgctc
gatgaaattcgccgtggcgactgggtgccccgttcggtgcaccgaaatagccggatgatc
gctgaggcgatcgacaaggtggaaaagcagcatggtcgcgatgctcgtgataccgaggtc
gcgagccaactgggtgtctccctgcacgagtatcacagcatgttgcaggatgtctcctgt
ggcaagatcatcggcatcgaagatctgggtgtcagcgaggatgtgatcggtggtgagggg
gcctgtgagcgacatggctatgaagagttagcgagcgatcgtttccaaatagcgctcgct
gagaatatatcgcgtctgcctgagcgggaggcgctggtactctctctttattacgatgag
gagctcaatctgcgtgaaattggcgagatcctcaacgtgagcgaatcgagggtcagccag
atccacagtcaggcgatgcacagattgcgcgctagattgcgagattggcaagtataa
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integrated database retrieval system
