Entry |
|
Symbol |
sbcD
|
Name |
(GenBank) exonuclease subunit SbcD
|
KO |
K03547 | DNA repair protein SbcD/Mre11 |
|
Organism |
|
Brite |
KEGG Orthology (KO) [BR:asim00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:asim03400]
FE240_11945 (sbcD)
DNA repair and recombination proteins [BR:asim03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FE240_11945 (sbcD)
Archaeal homologous recombinant proteins
FE240_11945 (sbcD)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(2551794..2553011)
|
AA seq |
405 aa
MKLLHTADWHLGHQLHGHDRHAEHQAFLDWLAATIAERRPDALLVAGDLFDTANPPASAW
QQLYRFLARLRADHPALNIVLIGGNHDSPSKLDAPHELLRAFDLHLVGSVSRDSAGQLDI
ERLLVPLRGSDGAVLAWCAAVPFLRSSDLRPAELAEGADRLVEGVRDIYRQVLEEGRRRA
GDLPLIAMGHAYLARGQLSELSERKVLGGNQHALPGDLFTGADYTALGHLHLAQQIGDKV
HYSGSPLPLSLAEAEYRHQVLEVDFHGREASVSRLMVPRAVEMIRLPEQTLDEALAAIAA
LDLPECELAARPFLEVRLLLPKPEARIRERVLAALEGKPVRLARIAPRYSGSGRELAAGV
RVRLDEMSPEAVFRLCYQRQFEGEPDDALLASFNEMVQQVKEHEQ |
NT seq |
1218 nt +upstreamnt +downstreamnt
atgaaactcctgcacaccgccgactggcatctggggcatcagctccatggccatgatcgc
cacgccgagcaccaggcctttctcgactggctggcggccaccatcgcagagcgccgcccc
gacgccctgctggtggccggtgatctgttcgataccgccaatccccccgccagcgcctgg
caacagctctatcgctttctggctcgtttgcgggccgatcaccccgcccttaacatcgtg
ctcatcggcggtaaccatgactccccctccaagctcgatgccccgcacgaactgctgcgc
gccttcgatctgcatctggtgggcagcgtcagccgcgatagtgcgggacagctcgacatc
gagcgcctgctggtgccactgagggggagcgatggggctgttctggcctggtgtgcggcg
gtgccgtttctgcgcagcagcgatctgcgcccggccgagctggccgaaggggcggatcgg
ctggtggaaggggttcgtgacatctatcgccaggtgctcgaagaggggcgccggcgggcc
ggcgatctgccgctcatcgccatggggcacgcctatctggcgcgcggccagctctctgaa
ctctccgagcgcaaggtgcttggcggcaaccagcacgccctgccaggggatctgtttacc
ggagccgattacacggcccttggccacctccacctggcccagcagataggggacaaggtg
cactacagcggctccccgctgcccctttcactggccgaagctgagtatcgccaccaggtg
ctggaggtagactttcacggccgtgaggccagcgtgtcgcgcctcatggtgccgcgcgcc
gtcgagatgatccgcctgcccgagcagacgctcgatgaggcgttggccgccattgccgca
ctggatctgcccgagtgtgagctggccgcgcgcccctttctcgaggtgcgtctgctgttg
cccaagccggaggcgcggatccgcgagcgcgtgctggcggcgctggagggcaagccagtg
cggctggcgcgcatcgcgccccgctacagcggcagtgggcgggagctggctgccggtgtc
cgggttcggcttgacgagatgagcccggaggcggtgtttcgtctttgctatcagcgtcag
tttgaaggggaaccggatgatgccctgctggcctcgttcaacgagatggtccagcaggtt
aaggagcatgaacaatga |