Aeromonas simiae: FE240_13485
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Entry
FE240_13485 CDS
T07073
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
asim
Aeromonas simiae
Brite
KEGG Orthology (KO) [BR:
asim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asim03009
]
FE240_13485 (rlmD)
Enzymes [BR:
asim01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
FE240_13485 (rlmD)
Ribosome biogenesis [BR:
asim03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FE240_13485 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
Methyltransf_11
PCMT
TRM5-TYW2_MTfase
RrnaAD
MTS
Ubie_methyltran
Methyltr_RsmB-F
Cons_hypoth95
Methyltransf_15
UPF0020
Methyltransf_23
PrmA
Methyltransf_4
N6_N4_Mtase
CMAS
TehB
Motif
Other DBs
NCBI-ProteinID:
QFI55612
UniProt:
A0A5J6WX93
LinkDB
All DBs
Position
complement(2856409..2857731)
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AA seq
440 aa
AA seq
DB search
MAQFFTPKKVAKQSQHIECTIDNLDHHCVGVGRFDGKAIFVEGAQPGERVKVRLTEQKKQ
YAHGQLLKVVQASPERIEPFCPHYRECGGCSTQHMTLAHQHEAKQQGLRTLMVRLGGVEA
PPLEPVLTGAERGYRRVCRLALRFDKGERRARLGFRRRQSSELVEIAACPVLEASLSALI
TPLRALFARLKNQRELGHVELLQADEGMLMLLRHTGRPNEHDRALLTEFAQSHELDLYLQ
DGSDRFEPLHQTMTPSYRLGELSLTFAPGDFIQVNRSVNDAMVTRALAWLDVQPGDKVLD
LFCGVGNFTLPLAAMAREVVGVEGELAMVRRGQQNAERNGLNNVRFYKADLAADITDLPW
AREGFDRVLLDPARPGALEVMPHIAKLAPRRVVYVSCNPVSLARDSKVLTQAGYRLARLG
MLDMFPHTGHLESIALFERE
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtttttcaccccaaagaaagtcgcaaagcaatcccaacatattgaatgcact
atagataacctcgatcaccattgcgtgggggtgggccgcttcgatggcaaggccatcttc
gtcgaaggggcgcagcccggtgagcgggtcaaggtgcgcctgaccgagcagaaaaaacag
tatgcccatggccaactgctcaaggtggttcaggcctcccccgagcggattgaaccgttc
tgcccccactatcgggagtgcggcggttgcagtacccagcacatgacgctagcgcaccag
catgaggcaaagcagcaagggttacgcactctgatggtgcgccttggcggtgtcgaagcc
ccgcccctcgagccggtgctgaccggtgccgagcgtggctatcgtcgggtgtgccgtctg
gccctgcgctttgacaagggcgagcgccgtgcacgactcggttttcgtcgccgccagtcc
agtgagctggtcgagattgccgcctgcccggtgctggaggcctccctctccgcgctcatc
acgccgctgcgcgccctgttcgctcgcctcaagaaccaacgtgagctaggccatgtcgag
ctgttgcaggcggatgagggaatgttgatgctgctgcgccataccggccgccccaacgag
catgaccgcgccctgctgaccgagtttgcccaaagccatgagctggatctctatttgcaa
gatggcagtgaccgcttcgagccgttgcatcagacaatgaccccttcgtatcgccttggg
gagctgtcgctgacctttgcccctggggatttcatccaggtcaatcgcagtgtcaacgat
gccatggtgacgcgggccctggcatggctggatgttcagcctggcgacaaggttctcgac
ttattctgcggcgtcggtaatttcaccttgccactggcggcaatggcccgcgaggtggtc
ggggtggaaggggagctcgccatggtgcgccgtggtcagcagaacgccgagcgtaacggt
ctgaacaatgtccgcttctacaaggcggatctggctgccgatatcacggatctgccgtgg
gcacgtgaggggttcgatcgggtgttgcttgacccggcccgtcccggtgcgctggaggtg
atgccgcatattgcgaaacttgcgccgcgccgcgtggtctatgtgtcgtgcaacccggtt
tctctggcccgtgacagcaaggtgctgacccaggctggctaccggctcgcccggctcggc
atgttggacatgttcccccataccggtcatttggagtcgatcgccctgttcgaaagggag
tag
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