Aeromonas simiae: FE240_14930
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Entry
FE240_14930 CDS
T07073
Symbol
csrD
Name
(GenBank) RNase E specificity factor CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
asim
Aeromonas simiae
Brite
KEGG Orthology (KO) [BR:
asim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asim03019
]
FE240_14930 (csrD)
Messenger RNA biogenesis [BR:
asim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FE240_14930 (csrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES4
GGDEF
Motif
Other DBs
NCBI-ProteinID:
QFI55866
UniProt:
A0A5J6WXL1
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All DBs
Position
complement(3133510..3135435)
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AA seq
641 aa
AA seq
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MKLTTQLVSFITLCVITAMAMVLLGGVFSFRQLGFELQEKKVQALAEVLDRQLSVQHDTQ
EMAQWMPTLLRSAHVVSLEVTQGEASLYRFQDLVARELDDPLIDYRYALPQHPGMEARFR
LERPFKEFEYSIEAMSWISFGIFIVVFGLWFSIRWLRLQLRGAELLNHRAELILAGRLNK
LNHDTSEEWPASASQAFDQLLAELADARKERSRFDNFIRSNAFVDKVTGTGNRIFFDNRL
ESAIRDASAMAGGLLLVELSGLEALESDDPQIDEVLQEASIALAPFVRKFAGALQARYAA
HVLAILLPNMAEAELVDGADQILKNLHRLHWPAGVSGENAIHIGAVCYRPDDTLAQVQEE
GELALKSARLQGDSGWFLFEKAIADEEETSKGTVRWRTLLTRRIDERAIHLYCQPVMQEP
GQLILQEELQTRIDDEQGRELLAGVFMPMAEKAGMLLPLDRLLATRVLALLQSRPADAPP
ISVNLCAQSLLHRDFQRWLFFSLFQLPRSKNEHLIIELSEAHITRYFEALRKPLRSLRML
GCRLTVTHAGQDVVSTQYIKEFDISFLKLHTSLVRDIHLRQVNQMAVRSLIGGCANTQAR
VIAVGVESGEEWHCLRHLGVHAGQGQWFAEPAPLRSALPDL
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcactacccaactcgtctctttcatcaccctgtgcgtcatcaccgccatggcc
atggtgttgctcggtggcgtctttagtttccgccagctcgggttcgagctgcaggagaaa
aaggtacaggcgctggctgaggtactcgatcgccagctctcggtgcagcatgacacccag
gagatggcgcagtggatgccaaccttgctgcgctcggcccatgtggtcagcctggaggtg
acgcaaggggaggcgagtctctatcgtttccaggatctggtggcgcgtgagctcgacgat
ccgctcatcgattaccgttatgcgctgccccagcatcccggcatggaggccagattcagg
ctggagcgccccttcaaggagtttgaatactccatcgaggcgatgtcgtggatttcgttt
ggcatcttcatcgtggtgttcggcctgtggttctctattcgctggttgcgtttgcagctg
cgcggggccgagttgctcaaccacagggccgagctgatcctcgccggccgcttgaacaag
ctcaatcacgacacgagcgaggagtggccggccagtgccagccaggcattcgatcagctg
ctggccgaattggccgatgcgcgcaaggagcgcagccgcttcgataacttcatccgcagc
aacgccttcgtcgacaaggtcaccggcaccggcaaccgcatcttctttgacaaccggctg
gagagcgccatccgcgatgcctcggccatggccggtgggctgttgctggttgagctgagc
ggcctcgaggcgctggagtcggatgatccgcagatcgatgaggtgctgcaggaggcgagc
atcgcccttgcccccttcgtgcgcaagtttgccggcgcgctacaggcgcgctatgcggcc
catgtgctggccattttgctgccgaacatggccgaggccgagttggtggacggggcggat
cagatcctcaaaaacctgcaccggctgcactggcccgctggggtgtccggggagaacgcc
atccacatcggtgcggtctgctaccggccggatgataccctggcccaggtgcaggaggag
ggggagctcgccctcaagagcgcccggctgcaaggggacagcggctggttcctgttcgag
aaggcgatcgccgacgaggaggagaccagcaaggggacagtgcgctggcgcaccctgctg
acccggcgcatcgatgagcgggccattcatctttactgccagccggtgatgcaggagccg
ggtcagctgatcttgcaagaggagttgcagactcgcatcgacgacgagcaggggcgcgag
ctgctggccggcgtctttatgccgatggcggagaaggcgggcatgctgctgccgctcgat
cgtctgctcgccacccgggtgctggccctgctgcaatcccgccctgctgacgcgccgccg
atcagcgtcaacctctgcgctcagagcctgctgcaccgcgatttccagcgctggctcttc
ttctctctgttccagctgccgcgcagcaagaacgaacacctcatcatcgagctctccgag
gcacacatcacccgctatttcgaggcgctgagaaaaccgctgcgctccctacgcatgctg
gggtgccggctgacggtgacccatgccgggcaggatgtggtgagtacccagtacatcaag
gagttcgacatcagcttcctcaagctgcacaccagcctggtgcgcgatatccacctgcgt
caggtgaatcagatggcggtacgcagcctgatcggcggctgtgccaacacccaggccagg
gtcatcgccgtcggcgtcgagagtggtgaggagtggcactgcctgcgtcaccttggcgtg
catgcgggtcaaggtcagtggtttgccgagccggcgccactgcgaagtgcgctccccgat
ctctga
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