Aeromonas simiae: FE240_16650
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Entry
FE240_16650 CDS
T07073
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
asim
Aeromonas simiae
Brite
KEGG Orthology (KO) [BR:
asim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asim03016
]
FE240_16650
Enzymes [BR:
asim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
FE240_16650
Transfer RNA biogenesis [BR:
asim03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FE240_16650
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Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
QFI56162
UniProt:
A0A5J6WYL6
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All DBs
Position
3491957..3493948
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AA seq
663 aa
AA seq
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MFQDNPLLAQLKQQIRENIPKKEGVIRASDRGFGFLEVDEKTSYFVPPPYMKKVLHGDRV
VALIRTEKEKEVAEPDELLEPGLTRFVARVKMFRDRLNVVPDHPLIKDAIKARPKKGLDE
KAFQEGDWVVATLKRHALNDNGFFAEIIEKIADKDDHNVPWWVVLARHNLAQIEPADLPE
WQDLETDLPRQDLTDVAFFTIDGPKTKDMDDALAIRETEQGWELLVAIADPTAYVPEGSE
LDKEAAQRAFTVYMPGRNVPMIPRTLSDELCSLKEGEVRDTLCARLTIHKDGLLDEQTEF
FAARIRSHARLNYDDVSDLFEHDKPLDVDAAVLAQLPLMKAMTEARINWRTEHALVFPDR
PDYDFELGENGEVLAIHMSPRRIANRMVEESMIAANICAGRVLGKSVGYGIFNVHTGFDE
DSLDGAIELLKGAEAPFEKEEIATLGGFCALRRWIDDLDTRWLDGKIRRFQSYALMSSEP
GAHFGLGLDAYATWTSPIRKYGDMVNHRLLKAVITGQQPGPRPSEELTQHLTDCRRLHRM
VERDIADWLYARFLAPVVATDKVFEGEIIDVMRAGLKVRLRENGAVAFVPAKLILDNKDR
LECNWDSGRVFLDKEPIMELGQTLAVKLAEVVEETRSIVAKPAVAIVPGPLPEAPAADTP
AAE
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgttccaagacaatccgctgctggcccagctcaagcaacaaatccgcgagaatatcccc
aagaaagagggcgtgatccgcgcctccgaccggggcttcggattcctcgaagtcgatgag
aagaccagctacttcgtgccgcccccctacatgaagaaagtgctgcacggtgaccgcgtg
gtcgccctgatccgcaccgaaaaggagaaggaggtcgccgagccggatgaactgctggaa
ccggggctgacccgttttgtggcgcgcgtgaagatgttccgcgatcgcctcaacgtggtg
ccggatcacccgctcatcaaggacgccatcaaggctcgtccgaagaaggggctggatgag
aaagcgttccaggaaggggactgggtggtcgccaccctcaagcgtcatgccctcaatgac
aacggcttcttcgccgagatcatcgagaagatcgccgataaggacgatcacaacgtgccc
tggtgggtggtgctggcgcgccacaacctggcccagatcgagccggccgatctgcccgag
tggcaggatctggaaaccgatctgccgcgccaggatctcaccgacgtcgccttcttcacc
atcgacggccccaagaccaaggacatggacgacgccctcgccatccgcgaaaccgagcag
ggctgggagctgctggtggccatcgccgacccgaccgcctatgtgccggaggggagcgag
ctggacaaggaggccgcccagcgcgccttcaccgtctacatgccggggcgcaacgtgccg
atgatcccgcgcaccctctccgacgagctgtgctccctgaaggaaggcgaagtgcgcgac
accctgtgtgcccgcctcaccatccacaaagatggcctgctggacgaacagaccgagttc
ttcgccgcccgcatccgctcccacgcccgcctcaactatgacgacgtctccgatctgttc
gagcacgacaagccgctcgacgtggacgccgccgtgctggcccaactgccgctgatgaag
gccatgaccgaggcgcgcatcaactggcgcaccgagcacgccctggtgttcccggaccga
cccgactacgacttcgagctgggcgagaacggcgaggtgctggccatccacatgtcgccg
cgccgcatcgccaaccgcatggtggaagagtcgatgatcgccgccaacatctgcgccggt
cgcgtgctgggcaagagcgtcggctacggcatcttcaacgtccacaccggcttcgatgag
gactccctcgacggcgccatcgagctgctcaagggggccgaggccccgttcgagaaagaa
gagatcgccacccttgggggcttctgcgccctgcgccgctggatcgacgacctcgacacc
cgctggctggatggcaagatccgccgcttccagagctatgccctgatgtcgtccgagccg
ggggcccacttcggcctggggctggatgcctacgccacctggacctcgccgatccgcaag
tacggcgacatggtcaaccaccgcctgctcaaggccgtgatcaccggccagcagccgggg
ccgcgtccgagcgaggaactgacccagcacctgaccgactgccgccgcctgcaccgcatg
gtggagcgcgacatcgccgactggctctatgcccgcttcctggctcctgtggtggcaacc
gacaaggtgtttgagggcgagatcatcgacgtgatgcgagctggcctcaaggtgcgcctg
cgcgagaacggcgccgtcgccttcgtgcccgccaagctgatcctcgacaacaaggatcgc
ctggagtgcaactgggacagcggccgcgtcttcctcgacaaggagccgatcatggagctg
ggccagaccctcgccgtgaagctggccgaggtggtggaggagacccgctccatcgtcgcc
aagcccgccgtggccatcgtccccggcccgctgcccgaagcgccggccgccgacaccccg
gctgccgagtaa
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