| Entry |
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| Symbol |
rpoB
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta
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| KO |
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| Organism |
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:asim00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FE240_18625 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:asim03021]
FE240_18625 (rpoB)
03400 DNA repair and recombination proteins [BR:asim03400]
FE240_18625 (rpoB)
Enzymes [BR:asim01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FE240_18625 (rpoB)
Transcription machinery [BR:asim03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FE240_18625 (rpoB)
DNA repair and recombination proteins [BR:asim03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FE240_18625 (rpoB)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
3896386..3900414
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| AA seq |
1342 aa
MVYSYTEKKRIRKDFGKRDQVLDTPYLLSIQLDSFKQFIEADPEGAYGLEAAFRSVFPIT
SYSGSAELQYVSYRLGEPVFDVKECQIRGVTYSAPLRVKLRMVLYDREAAAGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKVLYNARVIPYR
GSWLDFEFDAKDNLFVRIDRRRKLPASIILRALDFTTEEILATFFDTIRFEIKDGKLMMD
LVPERLRGETATFDIVANGNVVVEKGRRITARHIRQLEKDAITQIEVPVEYVVGKVSAKD
YLNPQTSELVVTANQELSLEAIANLSQAGFKHFEVLFTNELDHGAYMSETLRIDSSTNRL
EALVEIYRMMRPGEPPTREAAEQLFENLFFASERYDLSTVGRMKFNRRLGREDETGVGVL
TKDDIVEVMQRLIDIRNGNDEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDALMPQDLINAKPISAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRLCPIETPEGPNIGLINSLSVYSRTNEYGFLETPYRKVNDGVIT
DEVEYLSAIEEGKYVIAQANAATTEDGRLKDELIPCRHKGESTFMNADQIQYMDVSPQQI
VSVAAALIPFLEHDDANRALMGSNMQRQAVPTLRSDKPLVGTGMERAVAVDSGVTVVAKR
GGMVDQVDSSRIVIKVNEDELMPGEAGIDIYNLTKYTRSNQNTCINQRPCVMLGEPVMAG
DVLADGPSTDLGELALGQNLRVAFMPWNGYNFEDSILLNERIVQEDRLTTIHIQELACIS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYVGAEVKGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVYGTVVDVQVFTRDGVEKDKRAKEIEEMQLKQAKKDL
TEEFKILENGIFGRARNLLTSAGYSEDKLSKLDRTKWFELAIEDEGKQTELEQIAEQHVE
LKADFDKKFENKRRKIIQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVVSKIN
PVEDMPHDEFGRPVDIVLNPLGVPSRMNIGQILEVHLGLAAKGIGEKIDRMVKEQRELHE
MRNFLQQVYDLGEKDSQQVDIAELSDHEVRILVENLRKGLPVATPVFDGAKEREIKALLK
LADLPESGQITLIDGRTGKPFERKVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGDHRMEPGMP
ESFNVLLKEIRSLGINIELEEE |
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| NT seq |
4029 nt +upstreamnt +downstreamnt
atggtttactcttataccgaaaaaaaacgcattcgtaaggacttcggtaagcgagaccag
gtactggacacgccttatctgttgtccattcagctggactccttcaagcagttcatcgag
gctgacccggaaggtgcgtacggccttgaggctgccttccgtagcgttttcccgatcacc
agttactccggtagtgctgagcttcaatatgtcagctatcgcctgggtgagccggtattt
gatgtaaaagaatgccaaatccgtggagtgacctactccgcgccgctgcgcgtaaaactt
cgcatggtcctctatgaccgtgaagcggcagccggcaccgtcaaagacatcaaagaacaa
gaagtgtacatgggcgaaattccgctcatgaccgacaacggtacctttgtcatcaacggt
accgagcgtgtgatcgtctcccagctgcaccgcagcccgggtgtcttcttcgatcacgac
aagggcaagacccactcctccggtaaggtgctgtataacgctcgcgttattccctaccgt
ggttcctggctggatttcgagttcgatgccaaggacaacctgtttgtccgtatcgaccgt
cgccgtaagctgccggcttccatcatcctgcgtgcgctggacttcaccaccgaagagatc
ctggccaccttcttcgacaccatccgtttcgagatcaaggatggcaagctgatgatggat
ctggtgccggagcgcctgcgtggcgagaccgctaccttcgatatcgttgccaatggcaat
gtggtcgttgagaagggtcgtcgtatcaccgcccgtcacatccgccagctggaaaaagac
gccatcacccagatcgaggtaccggttgagtatgttgtgggcaaggtttccgccaaggat
tacctgaacccgcagaccagcgagctggtcgtgaccgccaaccaggaattgagcctggag
gcgatcgccaacctgtcccaagccggcttcaagcatttcgaggtcctgttcaccaacgaa
ctggatcacggtgcttatatgtccgagaccctgcgcatcgactccagcaccaaccgtctg
gaagccctggtagaaatctaccgcatgatgcgtccgggcgagccgcccactcgtgaagcc
gccgagcagctgttcgagaacctgttcttcgcttccgagcgttatgacctgtccaccgtg
ggtcgcatgaagttcaaccgtcgtctgggtcgtgaagacgagactggcgtcggtgtgctg
accaaggacgacatcgtcgaggtcatgcagcgcctcatcgacatccgtaacggtaacgac
gaagtggacgatatcgaccacctcggtaaccgtcgtatccgttccgtcggtgaaatggcc
gaaaaccagttccgcgtcggtctggtccgtgttgagcgtgccgtcaaggagcgcctgtct
ctgggcgacctggacgcgttgatgccgcaggatctgatcaacgccaagccgatctctgcc
gcggtcaaggagttctttggttccagccagctgtcccagtttatggaccagaacaacccg
ctgtccgaagtgacccacaagcgccgtatctctgcgctgggcccgggcggtctgacccgt
gagcgtgccggctttgaagttcgagacgtacacccgacccactacggtcgtctgtgcccg
atcgagacgcctgaaggtccgaacatcggtctgatcaactcgctgtccgtctactcccgt
accaacgagtacggcttcctcgagaccccgtaccgcaaggtgaacgacggtgtgatcacc
gatgaggttgaatacctctccgctatcgaggaaggcaagtatgtgatcgcacaggctaac
gctgcgaccaccgaagacggccgcctgaaggacgagctgatcccctgccgtcataagggt
gaatccaccttcatgaacgccgatcagatccagtacatggatgtgagcccgcaacagatc
gtttccgttgcagcggccctgatcccgttccttgagcacgatgacgcgaaccgcgcactg
atgggttcgaacatgcaacgtcaggccgtgccgaccctgcgctccgacaagccgctggtt
ggtaccggtatggagcgtgcggtggccgttgactccggtgtgaccgtcgttgccaagcgt
ggcggtatggttgaccaggtcgactcctcccgcatcgtgatcaaggtgaacgaagatgag
ctgatgcctggcgaagccggtatcgacatctacaacctgaccaagtacacccgttccaac
cagaacacctgtatcaaccagcgcccctgcgtgatgctgggtgagccggtgatggcgggc
gacgtgctggctgacggcccgtctaccgacctgggcgaactggcgctgggccaaaacctg
cgcgtcgcgttcatgccgtggaacggttacaacttcgaagactccatcctgcttaacgag
cgaatcgttcaggaagaccgtctgaccaccatccacatccaggaactggcctgtatctcc
cgtgataccaagctgggcccggaagagatcaccgctgacatcccgaacgtgggtgaggcc
gcgctgtccaagctggacgagtccggtatcgtctacgtcggtgccgaggtgaagggtggc
gatatcctggttggtaaggtgaccccgaagggcgaaacccaactgaccccggaagagaag
ctgctgcgcgccatctttggtgagaaggcctccgatgtgaaggactcctccctgcgcgtg
ccgaacggcgtctacggtaccgtggtcgacgtgcaagtctttacccgcgatggcgtggag
aaggacaagcgtgccaaggaaatcgaagagatgcagctcaagcaggccaagaaggacctg
accgaggagttcaagatcctcgagaacggtatcttcggtcgtgcccgcaacctgctgacc
tctgccggttacagcgaagacaagctctccaagctggatcgcaccaagtggttcgagctg
gccatcgaagacgaaggcaagcagaccgagctggagcagatcgccgaacagcacgtcgag
ctgaaggctgacttcgacaagaagtttgagaacaagcgtcgcaagatcatccagggcgat
gacctggcgccgggcgtgctgaagatcgttaaggtctatctggccgttaagcgtcgcatc
cagccgggtgacaagatggcgggccgtcacggtaacaagggtgtggtctccaagatcaac
ccggtcgaagacatgccgcatgacgagttcggccgtccggtcgacatcgtactgaaccca
ctgggcgtaccttcccgtatgaacatcggtcagatcctcgaagttcacctgggcctggcg
gccaaggggatcggcgagaagatcgatcgcatggtcaaggagcagcgcgaactgcacgag
atgcgcaacttcctgcaacaggtctatgacctgggcgagaaggacagccagcaggtcgac
atcgccgagctctccgaccatgaagttcgtattctggttgagaacctgcgtaagggtctg
ccggtcgccactccggtgttcgacggtgccaaggagcgtgaaatcaaggcgctgctgaag
ctggccgatctgccggaatccggtcagatcaccctgatcgacggtcgcaccggcaagccg
ttcgagcgcaaggttaccgttggctacatgtacatgctgaagctgaaccacttggtagac
gacaagatgcacgcgcgttctaccggttcctacagcctggttacccagcagccgctgggt
ggtaaggcgcagttcggtggtcagcgtttcggtgagatggaagtgtgggccctggaggct
tacggtgcggcatataccctgcaggagatgctgaccgtcaagtccgacgatgtgaacggc
cgtaccaagatgtacaagaacatcgtggatggcgaccaccgcatggagccgggcatgccc
gagtccttcaacgtgttgctgaaggaaatccgctccctgggtatcaacatcgagctggaa
gaagagtaa |
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