| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:asim00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FE240_18630 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:asim03021]
FE240_18630 (rpoC)
03400 DNA repair and recombination proteins [BR:asim03400]
FE240_18630 (rpoC)
Enzymes [BR:asim01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FE240_18630 (rpoC)
Transcription machinery [BR:asim03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FE240_18630 (rpoC)
DNA repair and recombination proteins [BR:asim03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FE240_18630 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
3900495..3904799
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| AA seq |
1434 aa
MKDLLKFLKAQTKTEEFDSIKIGLASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL
PSRIGLLLDMTLRDIERVLYFESYVVIEAGMTDLERSQMLTEEQYLDKLEEWGDEFDAKM
GAEAILELLRGIDLEGEVRTMREELDQTNSETKRKKTTKRLKLMEAFLQSGNKPEWMIMT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPT
LRLHQCGLPKKMALELFKPFIYGKLETRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VMLNRAPTLHRLGIQAFEPTLVEGKAIQLHPLVCAAFNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPASGEPIIVPSQDVVLGLYYMTRARIAAKGEGMVLSSPKEAEKVYRAG
LADLHARVKVRITEYVKNEAGELVAKTEMKNTTVGRAILSLILPKGMEYALIDPPMVLTE
AAKADLAANPQNWIKYVSNQAMGKKQISRLLNTCYRKQGLKDTVIFADQLMYTGFHYAAL
SGASVGIDDMLIPDAKKDIIAAAEAEVAEIQDQFLSGLVTAGERYNKVIDIWASANERVS
KAMMENLSKERAVNSLGEEEEQASFNSIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSI
IETPIVANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDMVVTESDC
GTVEGLWMAPLIEGGDVVEPLRERVLGRVVAEDVIKPGTEDEILVARNTLLDEHLCDLLE
RNSVDRVKVRSAITCETDFGICAHCYGRDLARGHLVNGGEAVGVIAAQSIGEPGTQLTMR
TFHIGGAASRAAAESSIQVKNTGTIKLQNAKFVHNSDDKLVITSRSTELTIMDDMGRTKE
SHKLPYGAVLEVKDGQAVNAGETVANWDPHTHPIITEVAGRIHFEHMIDGVTITRQTDEL
TGLSSIVVLDVNERPSAGKEMRPTVKLLDAAGNDVMIPGTDVAAQYFLPGKAIVNLEDGA
NVNVGDAVARIPQESGGTKDITGGLPRVADLFEARQPKEPAILAEISGTISFGKETKGKR
RLVITPTEGGDAYEEMIPKWRNLNVFEGEKVTKGEVLADGPESAHDILRLRGISPVANYI
VNEVQDVYRLQGVKINDKHIEVIVRQMLRKGEIMNSGDSEFIDGEQVEIARVNIANRRLV
AEGKTPATFRHVLMGITKASLSTESFISAASFQETTRVLTEAAVGGKRDELRGLKENVIV
GRLIPAGTGFAYHQGRITKRAAAARDVGVPQVTADEAQQNLADLLNAAGSFDEE |
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| NT seq |
4305 nt +upstreamnt +downstreamnt
gtgaaagacttactcaagtttttgaaggctcagaccaagaccgaagagtttgatagcatc
aagatcggtctggcctctcccgacatgatccgttcgtggtcgttcggtgaggtcaagaag
cctgagaccatcaactaccgcaccttcaaaccggagcgtgatggtctgttctgtgcccgt
atcttcggaccggtgaaggactacgagtgtctgtgcggcaagtacaagcgcctcaagcac
cgtggcgtgatctgcgagaagtgcggcgtcgaagtgacccagaccaaggtgcgccgcgag
cgcatgggccacatcgagctggccagcccgaccgctcacatctggttcctgaagtcgctg
ccgtcccgtatcggtctgctgctggacatgaccctgcgtgacatcgagcgcgtgctctac
ttcgaatcctatgtggtgatcgaagcgggcatgaccgatctcgagcgcagccagatgctg
accgaagagcagtacctggacaagctggaagagtggggtgatgagttcgacgccaagatg
ggtgccgaagccatcctcgagctgctgcgcggcatcgatctggaaggcgaagtgcgtacc
atgcgcgaagagctggatcagaccaactccgagaccaagcgcaagaagaccaccaagcgt
ctgaagctgatggaagccttcctgcaatccggcaacaagccggagtggatgatcatgacc
gtgctgccggtgctgccgccggatctgcgcccgctggtgccgctcgacggtggtcgtttc
gcgacctccgatctgaacgatctgtaccgccgcgtgatcaaccgtaacaaccgtctgaag
cgcctgctcgacctggctgccccggacatcatcgtgcgcaacgaaaagcgtatgctgcag
gaatctgtagatgcgctgctggataacggtcgtcgtggccgcgccatcactggctccaac
aagcgcccgctgaagtccctggctgacatgatcaagggtaagcaaggtcgtttccgtcag
aacctgctcggtaagcgcgtcgactactccggtcgttccgttatcaccgtaggtccgacc
ctacgcctgcatcagtgcggtctgcccaagaagatggccctcgagctgttcaagcccttc
atctatggcaagctggaaacccgtggtctggcgactaccatcaaggctgccaagaagatg
gtggagcgcgaggaagcggtcgtttgggacatcctggacgaagtgatccgcgagcacccg
gtcatgctgaaccgtgcgccgaccctgcaccgtctgggtatccaggcgttcgaaccgacc
ctggtcgaaggcaaggccatccagctgcacccgctggtgtgtgccgcgtttaacgcggac
ttcgatggtgaccagatggcggtacacgttccgctgaccctggaagcccagctcgaagcg
cgcgccctgatgatgtccaccaacaacatcctgtcgcccgcctccggtgagccgatcatc
gtgccgtcccaggacgtggtcttgggtctgtactacatgacccgtgcccgcatcgccgcc
aagggcgaaggcatggtgctgtctagcccgaaggaagccgagaaggtgtaccgcgccggt
ctggccgacctgcacgctcgcgtcaaggttcgcatcaccgagtacgtgaagaacgaagcc
ggtgagctggttgccaagaccgagatgaagaacaccacggtcggtcgtgccatcctgagc
ctgatcctgccgaagggcatggagtacgcgctgatcgatccgccgatggtgctgaccgag
gccgctaaggccgatctggctgccaacccgcagaactggatcaagtacgtctccaaccag
gccatgggcaagaagcagatctcccgtctgctgaacacctgctatcgcaagcagggcctg
aaggacaccgtcatcttcgctgaccagctgatgtacaccggtttccactatgcagccctg
tccggtgcctccgtaggcatcgacgacatgctgatcccggatgccaagaaggacatcatc
gccgccgccgaagccgaagtcgccgagatccaggatcagttcctgtccggtctggtgacc
gcgggcgaacgctacaacaaggttatcgacatctgggccagcgccaacgagcgtgtctcc
aaggccatgatggagaacctgtccaaggagcgcgccgtcaactccctgggcgaagaggaa
gagcaagcctctttcaacagcatctttatgatggctgactccggtgcacggggttctgct
gcccagatccgtcagctggccggtatgcgtggcctgatggcgaagccggacggctccatc
atcgaaaccccgatcgtggcgaacttccgtgaaggtctgaacgtactgcagtacttcatc
tccactcacggtgctcgtaagggtctggcggataccgcgctgaagaccgcgaactccggt
tacctgacccgtcgtctggttgacgtggcgcaggacatggtggtgaccgagagcgactgt
ggcaccgttgaaggtctgtggatggctccgctgatcgaaggtggtgacgtggtcgagccg
ctgcgtgagcgcgtgctgggtcgtgtggtggcggaagacgtcatcaagccgggtaccgag
gacgagatcctggtggctcgcaacaccctgctcgacgagcatctgtgtgacctgctggag
cgcaactccgtcgaccgtgtgaaggtacgttctgccatcacctgtgagactgacttcggt
atctgcgcccactgctacggccgagatctggcccgtggccacctggtgaacggtggtgaa
gcggtcggtgttatcgccgcccagtccatcggtgagccgggtacccagctgaccatgcgt
acgttccacatcggtggtgctgcatcccgtgccgcggccgagagcagcatccaggtgaag
aacaccggtaccatcaagctgcagaacgccaagttcgttcacaacagcgacgacaagctg
gttatcacctcccgttctaccgaactgaccatcatggacgacatgggccgtaccaaggaa
agccacaagctgccctacggtgccgtgttggaagtgaaggacggccaggctgtgaacgca
ggcgagaccgttgctaactgggacccgcacacccacccgatcatcaccgaagtggccggt
cgtatccacttcgaacacatgatcgatggcgtgaccatcactcgtcagaccgacgagctg
accggtctctcctccatcgtcgtgctggacgtcaacgagcgtccgagcgccggtaaggag
atgcgtccgaccgtgaagctgctcgatgcagccggcaacgacgtgatgatcccgggtacc
gatgtcgccgcccagtacttcctgccgggcaaggcgatcgtcaacctggaagatggtgcc
aacgtgaacgtgggtgacgcggttgcgcgtatcccgcaggaatccggcggtaccaaggac
atcaccggtggtctgccgcgcgttgcggatctgttcgaagcgcgtcaaccgaaagagccg
gccatcctggccgagatctccggtaccatctccttcggtaaggagaccaagggcaagcgt
cgtctggtgatcactccgaccgagggcggcgacgcctacgaggagatgattccgaagtgg
cgtaacctgaacgtcttcgaaggtgaaaaggtcaccaagggtgaagtgctggccgacggt
ccggaatctgcacacgatatcctgcgtctgcgtggtatcagcccggtcgccaactacatc
gttaacgaagtgcaggacgtttaccgtctgcagggcgttaagatcaacgacaagcacatc
gaagtcatcgtacgtcagatgctgcgtaagggtgagatcatgaactccggtgattccgag
ttcatcgatggcgagcaggtggaaattgcccgcgtcaacatcgccaaccgtcgactggtt
gccgaaggtaagacgccggcgacgttccgtcacgtgctgatggggatcaccaaggcttct
ctgagcaccgaatccttcatctccgcggcctccttccaggagactacccgcgtactgacc
gaagccgccgttggtggcaagcgcgatgaactgcgcggtctgaaggagaacgtgatcgtg
ggtcgtctgatcccggccggtaccggttttgcgtaccaccagggccgcatcaccaagcgc
gctgccgcagcgcgtgacgtgggtgtgccgcaggtgaccgccgacgaggcgcagcagaac
ctggcggatctgctgaacgcagccggtagcttcgacgaagagtaa |
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