Aeromonas simiae: FE240_18900
Help
Entry
FE240_18900 CDS
T07073
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
asim
Aeromonas simiae
Pathway
asim03030
DNA replication
asim03410
Base excision repair
asim03420
Nucleotide excision repair
asim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FE240_18900 (polA)
03410 Base excision repair
FE240_18900 (polA)
03420 Nucleotide excision repair
FE240_18900 (polA)
03440 Homologous recombination
FE240_18900 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asim03032
]
FE240_18900 (polA)
03400 DNA repair and recombination proteins [BR:
asim03400
]
FE240_18900 (polA)
Enzymes [BR:
asim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FE240_18900 (polA)
DNA replication proteins [BR:
asim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FE240_18900 (polA)
DNA repair and recombination proteins [BR:
asim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FE240_18900 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FE240_18900 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QFI56558
UniProt:
A0A5J6X2U1
LinkDB
All DBs
Position
3964388..3967120
Genome browser
AA seq
910 aa
AA seq
DB search
MAHPLILVDGSSYLYRAFFASQQADLRTSSGMPSGAVRVMTNMLRSLLKQYPESHVAVVF
DAKGKTFRNDLYADYKAHRPPMPDDLRSQVEPIHRIIRAMGLPLLIIEGVEADDVIGTLA
REATEKQLPVLISTGDKDMAQLVSDHVTLIDTMKDQVTDRDGVVEKFGVPPELIIDYLAL
MGDKVDNIPGMPGVGEKTALALLQGIGGIDAIAANLDKVAALGFRGSKTFADKFREQEAM
VRLSYTLATIKTDVELAVAIEQLELAPVDKESLLDVYREYEFRNLIKELEEGDNAEEAEA
EPAAPAIETEYACVLDEAELDGWIERLKGAELFAFDTETTSLDYMEARIVGVSFAIEPGK
AAYVPFGHDYLGAPAQLSEELVLGKLKPLLEDATLRKVGQNLKYDRNVLLNHGIELRGIA
YDTMLESYVLNSTGSRHDMDTLAQKYLGVETITFESIAGKGVKQLTFNQIELEQAAPYAA
EDADITLRLHHALWTQLSAVERLAGVFRDIEMPLLSVLARMERLGTPIEPKLLHQQSQEI
ETRLRELEQEVHALAGEEFNLGSPKQLGEILFTKLGLPVIKKTPKGAPSTAEEVLAELAE
TYELPRLLMEHRGLAKLKSTYTDKLPLMIKPQTGRVHTSYHQAVAATGRLSSSDPNLQNI
PVRNEQGRRIRQAFVPSPGFKLVAADYSQIELRIMAHLSGDKGLLTAFAEGKDIHRATAA
EVFGVELTAVTSDMRRSAKAINFGLIYGMSAFGLAKQLGIGRAEAQKYMDLYFERYPGVL
EYMERTRQQAEAQGYVETLFGRRLYLPEIKSRNAGLRKAAERAAINAPMQGTAADIIKRA
MITVDDWIQTEGGDDIRMLMQVHDELVFEIREERVAALVPAIKSMMSAAAELHVPLVVEA
GTGDNWDQAH
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggctcaccccctcattctggttgatggttcttcctatctctatcgggccttctttgcc
tcccagcaggccgatctgcgcacctcctccggcatgcctagcggcgccgtgcgggtgatg
accaacatgctgcgcagcctgctcaagcagtatccggagagccatgtggccgtggtgttt
gatgccaagggcaagaccttccgcaatgatctctatgccgattacaaggcccaccgtccg
ccgatgccggacgatctgcgcagtcaggttgaaccgattcatcgcattatccgcgccatg
gggttgccgctgctcatcattgagggggttgaggcggacgacgtcatcggcaccctggcg
cgggaagctaccgagaagcaactgccggtactcatcagcaccggggataaggatatggcc
caactggtgtcggatcatgtgaccctgatcgacaccatgaaggatcaggtgaccgaccgt
gacggtgttgtcgaaaagttcggtgtgccgcctgaactcatcatcgactacctggcgctg
atgggggacaaggtggacaacattccgggcatgcccggagtgggtgagaagaccgccctg
gccctgttgcaggggatcggtggcatcgatgcgatcgccgccaacctggacaaggtagcc
gcgctcggttttcgcggctccaagacctttgccgataagttccgcgagcaggaagcgatg
gtgcgcctctcctataccctagccaccatcaagaccgacgtggagctggcggtggccatt
gagcagctcgagctggcaccggtggataaagagagtctgctcgatgtttatcgagaatat
gagttccgtaatctcatcaaggagctggaagagggcgacaatgccgaggaggcagaggcc
gagccggcggcgccggccattgagaccgaatacgcctgtgtactggacgaggccgagctg
gatggctggattgaacgcctgaagggggccgagctgtttgccttcgacaccgagacgacc
agcctggactacatggaggcgcgcatcgtcggcgtatcgttcgccatcgaaccgggcaaa
gcggcctatgtgccgttcggccacgactacttaggggcgccggctcaactgagcgaagag
ctggtgctcggtaaactcaagccgctattggaagacgcgactctgcgcaaggtggggcag
aatctcaagtacgatcgcaacgtgctgctcaatcatggcatcgagctgcgtggcatcgcc
tatgacaccatgctcgaatcctacgtgctcaactccaccggcagccgccacgatatggat
accctggcccagaagtatctgggggtggagaccatcacttttgagtcgatcgccggtaaa
ggggtcaagcagttgaccttcaaccagattgagttggaacaggccgccccctatgcagcg
gaagatgccgacatcaccctgcgcctgcaccatgccctgtggacacagttgagtgcggtg
gagcgtctggcgggcgtgttccgagacatcgagatgccgctgcttagcgtgcttgcaagg
atggagcgactgggtaccccgatcgagcccaagctgctgcaccagcagagccaggagatt
gagacgcgtctgcgtgaactggagcaggaggtacacgcactggctggtgaagagttcaat
ctgggctcccccaagcagttgggtgagatcctctttaccaagctggggctgccggtcatc
aagaaaacgcccaagggggccccctccaccgccgaggaggtgctggccgagctggctgaa
acctatgaactgccgcgcctgctgatggagcaccgtgggttggccaagctcaagtcgacc
tataccgacaagctgccgctgatgatcaagccgcagaccggccgggtacacacctcctat
caccaggcggtggcggcgaccgggcgcctctcttcatcggatcccaacctgcaaaacatc
ccggtgcgcaacgagcaggggcgccgcattcgtcaggcctttgtgcccagccccggcttc
aagctggtggcggccgactactcccagattgagctgcgcattatggcgcacctctccggc
gacaaggggttgctgaccgcctttgccgaaggtaaggatatccaccgcgccacggccgcc
gaagtgtttggggttgagctgaccgctgtgaccagcgacatgcgccgcagcgccaaggcg
atcaacttcggcctgatttatggcatgagcgcctttggtctggccaagcagcttggtatc
ggccgtgccgaagcgcagaagtacatggatctctatttcgagcgctaccctggggtgctc
gagtatatggagcgcacccgccagcaggccgaggctcagggctatgtcgaaaccctgttt
ggccgtcgtctctatctgccggagatcaaatctcgcaacgccggcctgcgtaaggccgcc
gagcgtgctgctatcaacgctcctatgcaggggacggcggcggatatcatcaagcgagcc
atgataacggtggacgattggatccagaccgagggcggggatgacatccgcatgttgatg
caggtgcacgatgaactggtattcgagatccgtgaagagcgggtggcggcgctggtaccg
gccatcaagagcatgatgtcggcagcggctgagctgcatgttccgctggtggtcgaggcg
ggaacgggtgacaactgggatcaggcccactaa
DBGET
integrated database retrieval system