Entry |
|
Symbol |
polA
|
Name |
(GenBank) DNA polymerase I
|
KO |
|
Organism |
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:asim00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FE240_18900 (polA)
03410 Base excision repair
FE240_18900 (polA)
03420 Nucleotide excision repair
FE240_18900 (polA)
03440 Homologous recombination
FE240_18900 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:asim03032]
FE240_18900 (polA)
03400 DNA repair and recombination proteins [BR:asim03400]
FE240_18900 (polA)
Enzymes [BR:asim01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FE240_18900 (polA)
DNA replication proteins [BR:asim03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FE240_18900 (polA)
DNA repair and recombination proteins [BR:asim03400]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FE240_18900 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FE240_18900 (polA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
3964388..3967120
|
AA seq |
910 aa
MAHPLILVDGSSYLYRAFFASQQADLRTSSGMPSGAVRVMTNMLRSLLKQYPESHVAVVF
DAKGKTFRNDLYADYKAHRPPMPDDLRSQVEPIHRIIRAMGLPLLIIEGVEADDVIGTLA
REATEKQLPVLISTGDKDMAQLVSDHVTLIDTMKDQVTDRDGVVEKFGVPPELIIDYLAL
MGDKVDNIPGMPGVGEKTALALLQGIGGIDAIAANLDKVAALGFRGSKTFADKFREQEAM
VRLSYTLATIKTDVELAVAIEQLELAPVDKESLLDVYREYEFRNLIKELEEGDNAEEAEA
EPAAPAIETEYACVLDEAELDGWIERLKGAELFAFDTETTSLDYMEARIVGVSFAIEPGK
AAYVPFGHDYLGAPAQLSEELVLGKLKPLLEDATLRKVGQNLKYDRNVLLNHGIELRGIA
YDTMLESYVLNSTGSRHDMDTLAQKYLGVETITFESIAGKGVKQLTFNQIELEQAAPYAA
EDADITLRLHHALWTQLSAVERLAGVFRDIEMPLLSVLARMERLGTPIEPKLLHQQSQEI
ETRLRELEQEVHALAGEEFNLGSPKQLGEILFTKLGLPVIKKTPKGAPSTAEEVLAELAE
TYELPRLLMEHRGLAKLKSTYTDKLPLMIKPQTGRVHTSYHQAVAATGRLSSSDPNLQNI
PVRNEQGRRIRQAFVPSPGFKLVAADYSQIELRIMAHLSGDKGLLTAFAEGKDIHRATAA
EVFGVELTAVTSDMRRSAKAINFGLIYGMSAFGLAKQLGIGRAEAQKYMDLYFERYPGVL
EYMERTRQQAEAQGYVETLFGRRLYLPEIKSRNAGLRKAAERAAINAPMQGTAADIIKRA
MITVDDWIQTEGGDDIRMLMQVHDELVFEIREERVAALVPAIKSMMSAAAELHVPLVVEA
GTGDNWDQAH |
NT seq |
2733 nt +upstreamnt +downstreamnt
atggctcaccccctcattctggttgatggttcttcctatctctatcgggccttctttgcc
tcccagcaggccgatctgcgcacctcctccggcatgcctagcggcgccgtgcgggtgatg
accaacatgctgcgcagcctgctcaagcagtatccggagagccatgtggccgtggtgttt
gatgccaagggcaagaccttccgcaatgatctctatgccgattacaaggcccaccgtccg
ccgatgccggacgatctgcgcagtcaggttgaaccgattcatcgcattatccgcgccatg
gggttgccgctgctcatcattgagggggttgaggcggacgacgtcatcggcaccctggcg
cgggaagctaccgagaagcaactgccggtactcatcagcaccggggataaggatatggcc
caactggtgtcggatcatgtgaccctgatcgacaccatgaaggatcaggtgaccgaccgt
gacggtgttgtcgaaaagttcggtgtgccgcctgaactcatcatcgactacctggcgctg
atgggggacaaggtggacaacattccgggcatgcccggagtgggtgagaagaccgccctg
gccctgttgcaggggatcggtggcatcgatgcgatcgccgccaacctggacaaggtagcc
gcgctcggttttcgcggctccaagacctttgccgataagttccgcgagcaggaagcgatg
gtgcgcctctcctataccctagccaccatcaagaccgacgtggagctggcggtggccatt
gagcagctcgagctggcaccggtggataaagagagtctgctcgatgtttatcgagaatat
gagttccgtaatctcatcaaggagctggaagagggcgacaatgccgaggaggcagaggcc
gagccggcggcgccggccattgagaccgaatacgcctgtgtactggacgaggccgagctg
gatggctggattgaacgcctgaagggggccgagctgtttgccttcgacaccgagacgacc
agcctggactacatggaggcgcgcatcgtcggcgtatcgttcgccatcgaaccgggcaaa
gcggcctatgtgccgttcggccacgactacttaggggcgccggctcaactgagcgaagag
ctggtgctcggtaaactcaagccgctattggaagacgcgactctgcgcaaggtggggcag
aatctcaagtacgatcgcaacgtgctgctcaatcatggcatcgagctgcgtggcatcgcc
tatgacaccatgctcgaatcctacgtgctcaactccaccggcagccgccacgatatggat
accctggcccagaagtatctgggggtggagaccatcacttttgagtcgatcgccggtaaa
ggggtcaagcagttgaccttcaaccagattgagttggaacaggccgccccctatgcagcg
gaagatgccgacatcaccctgcgcctgcaccatgccctgtggacacagttgagtgcggtg
gagcgtctggcgggcgtgttccgagacatcgagatgccgctgcttagcgtgcttgcaagg
atggagcgactgggtaccccgatcgagcccaagctgctgcaccagcagagccaggagatt
gagacgcgtctgcgtgaactggagcaggaggtacacgcactggctggtgaagagttcaat
ctgggctcccccaagcagttgggtgagatcctctttaccaagctggggctgccggtcatc
aagaaaacgcccaagggggccccctccaccgccgaggaggtgctggccgagctggctgaa
acctatgaactgccgcgcctgctgatggagcaccgtgggttggccaagctcaagtcgacc
tataccgacaagctgccgctgatgatcaagccgcagaccggccgggtacacacctcctat
caccaggcggtggcggcgaccgggcgcctctcttcatcggatcccaacctgcaaaacatc
ccggtgcgcaacgagcaggggcgccgcattcgtcaggcctttgtgcccagccccggcttc
aagctggtggcggccgactactcccagattgagctgcgcattatggcgcacctctccggc
gacaaggggttgctgaccgcctttgccgaaggtaaggatatccaccgcgccacggccgcc
gaagtgtttggggttgagctgaccgctgtgaccagcgacatgcgccgcagcgccaaggcg
atcaacttcggcctgatttatggcatgagcgcctttggtctggccaagcagcttggtatc
ggccgtgccgaagcgcagaagtacatggatctctatttcgagcgctaccctggggtgctc
gagtatatggagcgcacccgccagcaggccgaggctcagggctatgtcgaaaccctgttt
ggccgtcgtctctatctgccggagatcaaatctcgcaacgccggcctgcgtaaggccgcc
gagcgtgctgctatcaacgctcctatgcaggggacggcggcggatatcatcaagcgagcc
atgataacggtggacgattggatccagaccgagggcggggatgacatccgcatgttgatg
caggtgcacgatgaactggtattcgagatccgtgaagagcgggtggcggcgctggtaccg
gccatcaagagcatgatgtcggcagcggctgagctgcatgttccgctggtggtcgaggcg
ggaacgggtgacaactgggatcaggcccactaa |