KEGG   Aeromonas simiae: FE240_18900
Entry
FE240_18900       CDS       T07073                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
asim  Aeromonas simiae
Pathway
asim03030  DNA replication
asim03410  Base excision repair
asim03420  Nucleotide excision repair
asim03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:asim00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FE240_18900 (polA)
   03410 Base excision repair
    FE240_18900 (polA)
   03420 Nucleotide excision repair
    FE240_18900 (polA)
   03440 Homologous recombination
    FE240_18900 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:asim03032]
    FE240_18900 (polA)
   03400 DNA repair and recombination proteins [BR:asim03400]
    FE240_18900 (polA)
Enzymes [BR:asim01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FE240_18900 (polA)
DNA replication proteins [BR:asim03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     FE240_18900 (polA)
DNA repair and recombination proteins [BR:asim03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     FE240_18900 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FE240_18900 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH_5
Other DBs
NCBI-ProteinID: QFI56558
UniProt: A0A5J6X2U1
LinkDB
Position
3964388..3967120
AA seq 910 aa
MAHPLILVDGSSYLYRAFFASQQADLRTSSGMPSGAVRVMTNMLRSLLKQYPESHVAVVF
DAKGKTFRNDLYADYKAHRPPMPDDLRSQVEPIHRIIRAMGLPLLIIEGVEADDVIGTLA
REATEKQLPVLISTGDKDMAQLVSDHVTLIDTMKDQVTDRDGVVEKFGVPPELIIDYLAL
MGDKVDNIPGMPGVGEKTALALLQGIGGIDAIAANLDKVAALGFRGSKTFADKFREQEAM
VRLSYTLATIKTDVELAVAIEQLELAPVDKESLLDVYREYEFRNLIKELEEGDNAEEAEA
EPAAPAIETEYACVLDEAELDGWIERLKGAELFAFDTETTSLDYMEARIVGVSFAIEPGK
AAYVPFGHDYLGAPAQLSEELVLGKLKPLLEDATLRKVGQNLKYDRNVLLNHGIELRGIA
YDTMLESYVLNSTGSRHDMDTLAQKYLGVETITFESIAGKGVKQLTFNQIELEQAAPYAA
EDADITLRLHHALWTQLSAVERLAGVFRDIEMPLLSVLARMERLGTPIEPKLLHQQSQEI
ETRLRELEQEVHALAGEEFNLGSPKQLGEILFTKLGLPVIKKTPKGAPSTAEEVLAELAE
TYELPRLLMEHRGLAKLKSTYTDKLPLMIKPQTGRVHTSYHQAVAATGRLSSSDPNLQNI
PVRNEQGRRIRQAFVPSPGFKLVAADYSQIELRIMAHLSGDKGLLTAFAEGKDIHRATAA
EVFGVELTAVTSDMRRSAKAINFGLIYGMSAFGLAKQLGIGRAEAQKYMDLYFERYPGVL
EYMERTRQQAEAQGYVETLFGRRLYLPEIKSRNAGLRKAAERAAINAPMQGTAADIIKRA
MITVDDWIQTEGGDDIRMLMQVHDELVFEIREERVAALVPAIKSMMSAAAELHVPLVVEA
GTGDNWDQAH
NT seq 2733 nt   +upstreamnt  +downstreamnt
atggctcaccccctcattctggttgatggttcttcctatctctatcgggccttctttgcc
tcccagcaggccgatctgcgcacctcctccggcatgcctagcggcgccgtgcgggtgatg
accaacatgctgcgcagcctgctcaagcagtatccggagagccatgtggccgtggtgttt
gatgccaagggcaagaccttccgcaatgatctctatgccgattacaaggcccaccgtccg
ccgatgccggacgatctgcgcagtcaggttgaaccgattcatcgcattatccgcgccatg
gggttgccgctgctcatcattgagggggttgaggcggacgacgtcatcggcaccctggcg
cgggaagctaccgagaagcaactgccggtactcatcagcaccggggataaggatatggcc
caactggtgtcggatcatgtgaccctgatcgacaccatgaaggatcaggtgaccgaccgt
gacggtgttgtcgaaaagttcggtgtgccgcctgaactcatcatcgactacctggcgctg
atgggggacaaggtggacaacattccgggcatgcccggagtgggtgagaagaccgccctg
gccctgttgcaggggatcggtggcatcgatgcgatcgccgccaacctggacaaggtagcc
gcgctcggttttcgcggctccaagacctttgccgataagttccgcgagcaggaagcgatg
gtgcgcctctcctataccctagccaccatcaagaccgacgtggagctggcggtggccatt
gagcagctcgagctggcaccggtggataaagagagtctgctcgatgtttatcgagaatat
gagttccgtaatctcatcaaggagctggaagagggcgacaatgccgaggaggcagaggcc
gagccggcggcgccggccattgagaccgaatacgcctgtgtactggacgaggccgagctg
gatggctggattgaacgcctgaagggggccgagctgtttgccttcgacaccgagacgacc
agcctggactacatggaggcgcgcatcgtcggcgtatcgttcgccatcgaaccgggcaaa
gcggcctatgtgccgttcggccacgactacttaggggcgccggctcaactgagcgaagag
ctggtgctcggtaaactcaagccgctattggaagacgcgactctgcgcaaggtggggcag
aatctcaagtacgatcgcaacgtgctgctcaatcatggcatcgagctgcgtggcatcgcc
tatgacaccatgctcgaatcctacgtgctcaactccaccggcagccgccacgatatggat
accctggcccagaagtatctgggggtggagaccatcacttttgagtcgatcgccggtaaa
ggggtcaagcagttgaccttcaaccagattgagttggaacaggccgccccctatgcagcg
gaagatgccgacatcaccctgcgcctgcaccatgccctgtggacacagttgagtgcggtg
gagcgtctggcgggcgtgttccgagacatcgagatgccgctgcttagcgtgcttgcaagg
atggagcgactgggtaccccgatcgagcccaagctgctgcaccagcagagccaggagatt
gagacgcgtctgcgtgaactggagcaggaggtacacgcactggctggtgaagagttcaat
ctgggctcccccaagcagttgggtgagatcctctttaccaagctggggctgccggtcatc
aagaaaacgcccaagggggccccctccaccgccgaggaggtgctggccgagctggctgaa
acctatgaactgccgcgcctgctgatggagcaccgtgggttggccaagctcaagtcgacc
tataccgacaagctgccgctgatgatcaagccgcagaccggccgggtacacacctcctat
caccaggcggtggcggcgaccgggcgcctctcttcatcggatcccaacctgcaaaacatc
ccggtgcgcaacgagcaggggcgccgcattcgtcaggcctttgtgcccagccccggcttc
aagctggtggcggccgactactcccagattgagctgcgcattatggcgcacctctccggc
gacaaggggttgctgaccgcctttgccgaaggtaaggatatccaccgcgccacggccgcc
gaagtgtttggggttgagctgaccgctgtgaccagcgacatgcgccgcagcgccaaggcg
atcaacttcggcctgatttatggcatgagcgcctttggtctggccaagcagcttggtatc
ggccgtgccgaagcgcagaagtacatggatctctatttcgagcgctaccctggggtgctc
gagtatatggagcgcacccgccagcaggccgaggctcagggctatgtcgaaaccctgttt
ggccgtcgtctctatctgccggagatcaaatctcgcaacgccggcctgcgtaaggccgcc
gagcgtgctgctatcaacgctcctatgcaggggacggcggcggatatcatcaagcgagcc
atgataacggtggacgattggatccagaccgagggcggggatgacatccgcatgttgatg
caggtgcacgatgaactggtattcgagatccgtgaagagcgggtggcggcgctggtaccg
gccatcaagagcatgatgtcggcagcggctgagctgcatgttccgctggtggtcgaggcg
ggaacgggtgacaactgggatcaggcccactaa

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