Aquicella siphonis: AQUSIP_10720
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Entry
AQUSIP_10720 CDS
T06267
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
asip
Aquicella siphonis
Brite
KEGG Orthology (KO) [BR:
asip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asip03032
]
AQUSIP_10720 (hupB)
03036 Chromosome and associated proteins [BR:
asip03036
]
AQUSIP_10720 (hupB)
03400 DNA repair and recombination proteins [BR:
asip03400
]
AQUSIP_10720 (hupB)
DNA replication proteins [BR:
asip03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AQUSIP_10720 (hupB)
Chromosome and associated proteins [BR:
asip03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AQUSIP_10720 (hupB)
DNA repair and recombination proteins [BR:
asip03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AQUSIP_10720 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
PT-TG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
UBA_HYPK
Motif
Other DBs
NCBI-ProteinID:
VVC75777
UniProt:
A0A5E4PH40
LinkDB
All DBs
Position
1:1132730..1133005
Genome browser
AA seq
91 aa
AA seq
DB search
MNRAELIDLISDKAELTKTSASRALDALLEGVTISLQNGDPVVLVNFGTFTVKQRAAREG
RNPSTGEKIKIKAAKVVGFKAGKALKEAVKA
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaatagagcagaacttatcgatctgatttcagacaaggctgaattaaccaagacgtct
gcgtcacgtgcacttgatgcacttctggaaggcgtgaccatatcactgcaaaatggcgat
ccagtcgtattagttaattttggtacgtttactgtcaaacagcgtgcggctcgtgaagga
cgcaatccttcgaccggtgaaaaaatcaagattaaagcagcaaaagtagtgggattcaaa
gctggcaaggcattgaaagaggcggtaaaggcctga
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