Aquicella siphonis: AQUSIP_11110
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Entry
AQUSIP_11110 CDS
T06267
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
asip
Aquicella siphonis
Pathway
asip03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
asip00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AQUSIP_11110 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asip03019
]
AQUSIP_11110 (rnc)
03009 Ribosome biogenesis [BR:
asip03009
]
AQUSIP_11110 (rnc)
03036 Chromosome and associated proteins [BR:
asip03036
]
AQUSIP_11110 (rnc)
Enzymes [BR:
asip01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
AQUSIP_11110 (rnc)
Messenger RNA biogenesis [BR:
asip03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AQUSIP_11110 (rnc)
Ribosome biogenesis [BR:
asip03009
]
Eukaryotic type
90S particles
RNase
AQUSIP_11110 (rnc)
Prokaryotic type
rRNA processing factors
AQUSIP_11110 (rnc)
Chromosome and associated proteins [BR:
asip03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
AQUSIP_11110 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
VVC75814
UniProt:
A0A5E4PG48
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All DBs
Position
1:1176537..1177202
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AA seq
221 aa
AA seq
DB search
MSDELSLKLNYEFKQPKYLKIALTHRSKGGEHNERLEFLGDAVVNFVIAEILYQQFSKAT
EGELSRWRASLVNRDTLADLAKEFGLGRFLFLGPGELRSGGSERQSILSCAMEAIIGAVY
LDGGFDTARRKIAEWYSPLLQSLSSASNHKDPKTLLQEYLQSRRMALPVYKVEAISGEAH
QQVFTVSCAVEGLEQQTLGKGTSRRRAEQDAAQAMLSALKK
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgaactatctttaaagctaaattatgaatttaaacagcccaagtatctcaag
attgcattaacgcatcgcagcaagggcggcgaacataatgaacggctggagtttttaggc
gacgcggttgtgaactttgtaattgccgaaattctatatcagcagttttccaaggcgacg
gaaggcgagttaagccgctggcgcgcgtcgctggtcaatcgcgacaccctggctgacctg
gccaaggaatttggactgggacgattcctgtttttggggcccggtgaattgcgcagcggc
ggcagtgaaaggcaatccattctctcctgcgcgatggaagccattatcggcgctgtctat
ctggatgggggattcgataccgccagaaggaaaatcgcggaatggtacagccctttgctg
caatccttgtcgtcagcatccaatcataaagaccccaagacgctgttgcaggaatacctg
caaagccgccgcatggcactgcccgtatacaaggttgaagccatttccggtgaggcgcat
cagcaggttttcaccgtgagctgcgcggttgaaggcctggaacagcagacactgggaaaa
ggaacaagcaggcgcagggcagaacaagacgcggcgcaagccatgctgtcggcattgaaa
aaatga
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