Aquicella siphonis: AQUSIP_13940
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Entry
AQUSIP_13940 CDS
T06267
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
asip
Aquicella siphonis
Brite
KEGG Orthology (KO) [BR:
asip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asip03400
]
AQUSIP_13940 (addB)
Enzymes [BR:
asip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AQUSIP_13940 (addB)
DNA repair and recombination proteins [BR:
asip03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AQUSIP_13940 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
ADDB_N
Motif
Other DBs
NCBI-ProteinID:
VVC76089
UniProt:
A0A5E4PGJ0
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All DBs
Position
1:1450885..1453596
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AA seq
903 aa
AA seq
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MSKHFPQTSFFKNLRPGTVVLTPNRRLSATLHKLYQQYQLNANNQVWETPDILPLSSWIH
SLWNNYCADTTESHPLILNSIQEHYLWEKILISSRENDQLLQVSETAKLAKSAWRLLNEW
QVDIHDPCFGTSEDYAALRRWIMKFQQLCLDHHWIDHASLIQLVMDQIIANAITPPAAIY
LYGFTEYSPQLQRFLKACENAGSRIYHEECGTMAPVCRRISLPDQENEIQTMARWAKAVL
ANQGSAAIGCVIPSLDKMRDRVAQIFSEVFADPVIDQPVAETTRFNISAGKSLAQYPVIN
SALLILSLHKKNIPIETMSYLLATPFMGDAEYEHVRRASFDSRLRQHNKSTYHLGNSAGA
NFQTSKLDLKHHCPCFAKRIQQYLDTLDNITEPLTYAEWANVFSQLLTVCGWPGERSLNS
EEYQVTETWLELLVSMGTLDTVSTPANFTQAWHALQKMTADTVFQPHSPEAPIQVLGMLE
AAAMPFDYLWVTGMDDTAWPQQPHPHPFIPKRIQRELRMPHATAERELTFCKSLLNQYIH
SAQEVVFSHADKNDELEMQPSPLIREIKSVNIEDLSLAPFIPPDMRIFLSRQIDIFYDEQ
APAVTAEERIHGGVSVIKQQALCPFKSFAEWRLHAHALETPLPGLRSKDRGTLIHKAMEI
IWNQLEDQSRLIAMDNQQLNELIENSIVDALNTASHSHSEFTQYMTLEKKRLQKLISGWL
DLEKTRPPFKVINNEKNAVFNLGQLALNIRIDRIDQLGDGNKLIIDYKTGKQNDIAGWFS
DRPEEPQLPLYSLLDPEHTCSIAFAQIHPGEYVFKGISRYALDMPGIRMITEIKKTTALS
WGEQISQWNETLNKLSADFCLGDARVDPKDPPQTCNWCALHPLCRINEEIHITDAVSPGT
RQP
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacactttcctcagacttcatttttcaagaatctccggcccggcacggttgta
ttgacgcctaaccggcggctatccgccaccttgcacaagctttatcaacaatatcaactg
aacgccaacaaccaggtttgggaaacacccgatattcttcctctctcgagctggatccac
agcctctggaataactattgcgcagacaccacagaatcgcatcctctcatcttgaattcc
atacaggaacattatctctgggaaaaaatattaatctcgtcccgcgagaacgatcaattg
ctgcaggtgtctgaaaccgccaaactggcgaaatccgcctggcgcctgctgaatgaatgg
caagtcgacattcacgatccctgttttggcacttcggaggattatgcagcattgcgccga
tggatcatgaagtttcaacaactatgcctggatcatcactggatcgatcatgcctcatta
atccagctagtcatggatcagatcattgcgaatgcgattacaccgccagccgcgatttac
ttgtacggatttacagaatattcgccacagttacagcgatttctgaaagcatgcgaaaat
gccggcagccggatttatcacgaggaatgcggaaccatggcgccggtgtgcagacgcatc
agtcttcccgaccaggaaaatgaaattcaaaccatggctcgctgggccaaggccgtgttg
gccaaccagggctctgccgcgataggctgcgtgattccctcgctggataaaatgcgagac
cgtgtagcgcagattttttccgaagtgttcgcagatcctgttattgatcaacccgttgct
gaaaccacccggtttaacatctcggccggcaagagcctcgcacaataccccgtcatcaac
agtgccctgctgatattgtcgttacataaaaaaaacataccgatagaaaccatgagttat
cttctggcaacgccattcatgggcgacgcagagtatgagcatgtacggagagccagtttc
gacagccgcctgcgccaacacaacaaaagcacttaccaccttggcaattcagccggggca
aatttccaaaccagcaagctggatctcaaacatcactgtccctgttttgcgaagcgcatt
cagcaatacctggatacgcttgataacatcacagagccgctgacttatgcggaatgggcg
aatgtattcagccaattattgactgtgtgcggatggcctggcgagcgcagcctgaacagt
gaagaatatcaggtcaccgagacctggctggaactgcttgtcagcatgggcacactggat
acggtctcgacgcctgccaatttcactcaggcatggcacgccttgcaaaaaatgacggca
gacactgtgttccagccgcactcgccggaggcgccgattcaagtgttgggcatgctggaa
gccgccgccatgccttttgattatttatgggtaacaggcatggatgacacggcctggccg
cagcagccacatccacatcctttcatccccaaacgtatccagcgagagttgcgcatgccg
catgcgaccgccgaacgggaactgacattttgcaagagtcttttaaaccagtatatccat
agcgcgcaagaagtcgtttttagtcacgcagacaaaaatgacgagcttgaaatgcagccc
agcccgctgattcgcgagatcaagtctgtcaacatagaggatttatcactcgcgcccttc
attccgccagacatgcgcattttcctctcccggcagatagatattttttatgatgagcaa
gcgcccgcggtgaccgccgaagaacgcatacacggcggcgtcagcgtaataaaacagcaa
gctctctgccccttcaaatctttcgcggaatggcgcctgcacgcgcacgcgcttgaaaca
ccattacccgggctgagatcgaaagaccgcggcaccctcattcacaaggccatggaaatt
atctggaaccagctggaggatcaatccagattaattgccatggacaaccagcaattaaat
gaattgatcgagaacagcattgttgatgcgttaaataccgcgtcccattcacacagtgaa
ttcacccagtatatgactctcgagaaaaaacggctgcaaaagctgatttccggctggctg
gacctggaaaaaacccgcccgccgttcaaggtcatcaacaatgaaaaaaatgctgttttt
aacctggggcagcttgcgctcaacataaggatagaccgtattgaccagctcggcgacggg
aataaactcattatcgattataaaacgggaaaacagaatgatatcgccggctggttcagc
gaccgccccgaagaaccgcaattacccctgtattccctgcttgatccggagcatacatgc
agcatcgcattcgcgcaaatccatccgggtgaatatgttttcaagggaatcagccgttat
gcgcttgatatgcccggcatcagaatgattactgaaatcaaaaaaaccaccgccttatcc
tggggcgagcaaataagtcaatggaacgaaaccctgaataaactgagcgcggatttttgc
ctgggtgacgcgcgcgtcgaccccaaggatccgccgcaaacctgcaactggtgtgccttg
catcctttatgcaggattaatgaagagattcacatcactgatgcggtatcaccggggacc
cgtcagccatga
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