Aquicella siphonis: AQUSIP_16410
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Entry
AQUSIP_16410 CDS
T06267
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
asip
Aquicella siphonis
Pathway
asip00521
Streptomycin biosynthesis
asip00523
Polyketide sugar unit biosynthesis
asip00525
Acarbose and validamycin biosynthesis
asip00541
Biosynthesis of various nucleotide sugars
asip01100
Metabolic pathways
asip01110
Biosynthesis of secondary metabolites
asip01250
Biosynthesis of nucleotide sugars
Module
asip_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
asip00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
AQUSIP_16410 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
AQUSIP_16410 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
AQUSIP_16410 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
AQUSIP_16410 (rfbB)
00525 Acarbose and validamycin biosynthesis
AQUSIP_16410 (rfbB)
Enzymes [BR:
asip01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
AQUSIP_16410 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
VVC76330
UniProt:
A0A5E4PGZ6
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All DBs
Position
1:1725302..1726312
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AA seq
336 aa
AA seq
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MQKYQPRFMLVTGGAGFIGANFIRHVLANEPAVHIINLDKLTYAGSLDNLRDLPGGERHH
FIRGDITDAEFIRHVLQHHHIDTIVHFAAESHVDRSISGPAAFVETNVTGTFVLLESARY
HWFEVDEIDASQCRFHHISTDEVYGSLSGSEPPFTEKTAYAPRSPYSATKAGSDHLVSAY
FHTYGLPVTISNCSNNYGPYQHPEKFIPTIIRSCLNWQPVPIYGNGKNIRDWMYVDDHCK
GILDIIKHGKTGERYNLGGQNEWENIQLARYICEQIDKRRPREKSHSTLLEFVTDRPGHD
FRYAIDHAKIKTELGWEPQESFETGIKKTIDFYWRD
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagtatcaacctcgattcatgttggtcacgggcggcgcaggattcataggcgca
aatttcatccgtcatgtgcttgcgaacgaacctgcggttcatatcatcaatctcgacaaa
ctgacttacgcaggctcgcttgataatctcagggatttacccggcggcgaacgtcatcat
tttatccgcggcgacatcaccgacgccgaattcatacgccatgttctccagcatcatcat
atcgacactatcgtgcattttgcggccgaaagccatgtcgatcgatccatctcggggccc
gcggcatttgttgaaaccaatgtcacgggaacattcgtcctgctggaatccgcgcgttac
cactggtttgaagttgatgaaatcgatgcgtcgcaatgccggtttcaccatatatctacc
gatgaagtgtatggatccctgtccggcagcgaaccgcctttcacggaaaaaaccgcttac
gcaccgcgctcaccttattccgccaccaaagccggctcggatcatttggtcagcgcctat
tttcatacctacggattgccggtgaccatttccaattgttcgaataattacggcccatac
cagcatccggaaaaattcatccccaccatcattcgttcctgcctgaactggcagcctgtc
cccatttacggaaacggaaaaaatattcgtgactggatgtatgtcgatgatcactgcaaa
ggcattctggatatcatcaaacacggaaaaactggcgaacgttacaatctgggcggtcag
aacgaatgggaaaatattcaattggcgcgttacatctgcgaacagatagataaacgccgt
ccgcgtgaaaagtcacactcgactttactggaatttgttacagaccggcccggtcacgat
tttcgttacgccatcgaccatgccaagattaaaacggaactgggctgggagccgcaggaa
tccttcgagacagggatcaaaaagaccatagacttttactggcgagattag
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