Aquicella siphonis: AQUSIP_16720
Help
Entry
AQUSIP_16720 CDS
T06267
Symbol
lgrD
Name
(GenBank) Linear gramicidin synthase subunit D
Organism
asip
Aquicella siphonis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Condensation
PP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
VVC76361
UniProt:
A0A5E4PJ31
LinkDB
All DBs
Position
1:1760692..1764201
Genome browser
AA seq
1169 aa
AA seq
DB search
MLHRKTVQPQAAQKSLLLLEKHYPDTGSNHRSVAVEITGSIDITLLRKAMAAVIARHEML
RATVQMNSDGPVFNITPVSDLTSHSDWPLRYLDSTQIAHSSSEVISVPTVSPRVENLRDT
LTSLRAEDFIDGKFDLAHGPLWRSVLIKVGPDKYHFAMMFNHVMIDEGSIGVIFRDLSAC
YNAYLDNVTPALDPIPSLLELDFSLPLSEQSSRLLYWKQRLADLSSLNLQTDYSPRQSFR
FTGKRMHFTLNTDTVKRLSLPPEFQGFSHNQILLGVLYSLLYRYSGESDICIGITSSNRR
HQCVDAPTAEKLVNCFFNSMPLRLSSTKEASFIELLAQVKSSISSGLKNQLPLDMVFQHA
VSAESKSALRTAMPFNVMLVLNQPKPTLTLRHTFATPPVELDLGRCKFPYFAINLDMIDT
GEGALYQCCIEYNTDLFNDKTIERLIGHFQKAIEYFTQNPNGKISAAPLLLEEEVQLLDK
LNATVTPPVTNLLVPDFFHQQALACPDKTFIVFHPKEGEAVKLSYQEVDKQTTQLANFLK
SRGVGPGVPVGISLTRSPNLLIAMLAVLKAGGTIVTLETETCPALLHKIGNTKTSIILAD
NQTAPLFENICLPINLESGPTRDQISQESDQYHSPTEYGGVAPALTPGDPAYIMYTSGTS
GEKPEPKGVVLSHAGFANLMNALFEQDIQHGSKVICTALPTFDAFLYDVLCAMISRGELH
LTFESGRYSPRVLESIIRKHQINFGVFLPNLLSLLNPDLPLTDVTSMGASPHEDILTTWC
NANIHRKVRNGLGHTETGICLSLHTYRPGTDHTIIGRPVRNMQIFILNPNDFSLCPLGVP
GEIYVAGPGVAIGYLDNAALTQEKFPVMVYDSVKRVFTPSQDTSSPGAVRLYATGDYGCY
QLQPGNGHIDTVVVKFMGRQDRQLKINGVRVELDLVESVLRSLPFIKDVVVLPNQGLTGL
TAYLVPTNSEESAEHVIRKVRKFLPTTLLPSAAYPKSLTVLKEFPVTQNGKVDIRTLAAA
TTSSIVVEEQPITDLQAELRKIWSEILQKPISEINIHQSFKELGGDSFSMSSLEVVLTKK
YNPDSQDLDINFLTYHMTIAKLAEKIESMLKPKADPILLQPGAMIVGQTTLLFKRRTGKT
GSPPHSPGTSNVGDTASETYKPEQLKLSQ
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaccgaaaaaccgtccaaccgcaggcggcgcaaaaaagcttgctcctcctggaa
aaacactatcccgatactggcagcaatcatcgcagtgtggccgtggagattaccggctcc
atagacatcactcttttgagaaaagccatggcggctgtgatcgcccggcatgaaatgctg
cgcgccaccgtgcaaatgaattcggacggcccggtgttcaatatcacccctgtcagtgat
cttacatcacattctgactggcccttacgctacctggatagcactcaaatcgcccattca
tcctctgaggttatttccgtgcccaccgtctccccccgagtagaaaatctgcgggatacg
ctcaccagcctgcgcgcggaagatttcattgatggcaagtttgatctggcccatgggccc
ttgtggcgctccgtgctgatcaaagtcggccctgacaaatatcactttgccatgatgttc
aatcacgtcatgattgatgaaggttccattggcgtcatattcagggatttgtcggcatgt
tacaatgcttatcttgacaatgtcactcccgcactggaccccatcccctctctcctggaa
cttgacttttccttgcctttgtccgaacaaagcagccggttgctctactggaaacaacgc
ctcgctgatctctcatctcttaatctgcaaacagattattctcccaggcaatccttccgg
ttcacgggaaaacgcatgcatttcaccctgaacacggatacggtcaaaaggctgagtctg
ccgccggaattccagggtttttcccataaccagattctgcttggcgtcttgtattctctt
ctttaccgctacagcggagaatcggatatatgcataggaattacttcatccaaccgcaga
catcagtgcgtggatgcgccaaccgcggaaaagctggtgaactgtttttttaacagcatg
ccgctgcggctttcatcaactaaagaggcgtcatttattgaattgcttgcccaggtcaaa
tcaagcattagcagcggattaaaaaaccagttgccgctggatatggttttccagcacgcc
gtaagcgcagaatccaaaagcgcattgcgtacagcaatgccatttaacgtcatgctggta
ctcaatcagcccaaaccaactctgacattgcggcatacttttgcaaccccgcctgtggaa
ctggatttaggtcgttgcaaatttccttattttgcaatcaacctggatatgattgacaca
ggcgaaggcgcactctatcaatgctgcatcgaatataatacggatttattcaatgataag
actattgagcggctgataggacatttccagaaagccattgaatatttcacccagaatcca
aacggcaagatcagcgcggccccattactccttgaagaagaagtgcagctgctggacaag
cttaatgccactgtcacacccccagtcacgaatttgctggttcccgattttttccatcaa
caggctcttgcctgtccggacaagaccttcattgtctttcatcccaaagagggagaagcc
gtcaaattgtcctatcaggaagttgacaaacagacaacccagcttgccaattttctgaaa
tcccgtggagtcgggcccggggtgccagtcggcatttcactgacccggtcacccaacctt
ctgatcgccatgctggctgttttaaaagctggcggcaccatcgtgaccctggaaactgaa
acatgtcccgcgttacttcacaagataggaaacacaaaaacatcaatcattttggccgat
aatcagaccgcaccgttattcgaaaacatttgtctgcctattaatctggaatccggaccg
acgcgcgaccagatcagccaggaaagcgatcaataccattctcccaccgaatacggcggt
gttgctccggccctcacgcccggcgatcctgcctatatcatgtatacatctggaaccagc
ggtgaaaaacccgaacccaagggcgtcgtactttcgcatgcgggatttgccaatctgatg
aatgccctgtttgaacaagatatccagcacgggagcaaggtcatttgcacagccttgcca
actttcgacgcttttttatacgacgtgctttgcgccatgatttcccggggcgagctgcat
ttgacatttgaaagcggccgttattcccccagggtactggaaagtatcatacgaaaacac
cagatcaattttggtgtatttttacccaatctactcagcctgctcaatcccgatctgcca
ttgactgatgtcaccagcatgggcgcttcgcctcatgaagacattctgaccacctggtgt
aatgcaaatatccacagaaaagtccgtaacggcctaggccacacagaaacaggcatctgc
ctgtcattacacacttaccgtcccggcacagatcataccatcattggacgtccggtgcgt
aacatgcagattttcattctgaatcccaatgatttttccttatgtcctctgggtgtgccg
ggcgaaatatatgtcgcagggccaggcgttgccattggttaccttgacaatgccgccctg
acccaggaaaaatttccagtcatggtttatgactctgtaaaacgtgtctttactcccagc
caggacacatccagtcccggcgcggtcagattgtacgcgacaggggattacgggtgctat
cagctgcagcctggaaatggccatatagacaccgtcgtggtcaaattcatgggacgtcag
gacaggcaattaaaaatcaacggagtcagggttgaacttgatctggtagaatcagtgctt
cgcagcttgccattcattaaggatgtggtggttctgccaaaccaggggcttaccggtttg
accgcttacctggtacccacgaactctgaagaatctgcggaacatgtcatacgcaaggta
aggaaattccttcccactaccttgctgccctcggcagcttatccgaaatccctgactgtc
ctcaaggaatttccggttacacaaaacggtaaagtggatatacggacattagccgcggca
accacatcgtcaattgttgtggaagagcaacccataacagatttgcaggctgaattacgc
aagatttggtcagaaatactgcaaaaaccgatttcagagataaatatacaccagtcattc
aaagaattgggcggagattcattttcgatgtcatccctggaagtcgtactgactaaaaaa
tacaatccggattcccaagacctggatatcaattttctgacttatcatatgaccatcgcc
aagttggccgaaaaaattgaatcaatgctgaagcccaaagcagatccgattctcctccag
cccggagccatgattgttggtcagacaactctgctttttaaacgtcgcacgggtaaaacg
ggttcgccgccgcatagccctggtacctcaaacgtaggcgatacagcaagcgaaacctat
aaacctgaacagttgaaattatcgcagtaa
DBGET
integrated database retrieval system
