Aquicella siphonis: AQUSIP_16820
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Entry
AQUSIP_16820 CDS
T06267
Symbol
rlmE
Name
(GenBank) Ribosomal RNA large subunit methyltransferase E
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
asip
Aquicella siphonis
Brite
KEGG Orthology (KO) [BR:
asip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asip03009
]
AQUSIP_16820 (rlmE)
Enzymes [BR:
asip01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
AQUSIP_16820 (rlmE)
Ribosome biogenesis [BR:
asip03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AQUSIP_16820 (rlmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Methyltransf_31
Methyltr_RsmB-F
Methyltransf_23
AlaDh_PNT_N
Cep192_D7
Motif
Other DBs
NCBI-ProteinID:
VVC76370
UniProt:
A0A5E4PH52
LinkDB
All DBs
Position
1:complement(1772559..1773185)
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AA seq
208 aa
AA seq
DB search
MTSKSSRRWLREHFTDTYVKQAQKEGYRSRAVYKLLEFQERYHLFRSGMTVVDLGAAPGG
WSQLVVKLIKPGGRMIAMDILPMEPVEGVEFIQGDFSNDEVLNTLLEHISSNKADWVISD
MAPNMSGNESIDIPRSMYLSELALDFALRVLAPGGGFLIKAFQGEGIDAFLAEIKRNFKS
VVIRKPKASRDRSREIYILARELKRGVE
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtaaaagcagccgccgctggctaagagaacacttcacagacacgtacgtcaaa
caggcgcaaaaggaaggatatcgctcgcgcgcagtttataagctgcttgaatttcaggag
cgttaccatttgttcaggtccggcatgactgtcgttgatctgggtgcggctcctggaggc
tggagccagcttgtggtcaagcttatcaagccgggcggccgcatgatcgccatggatatt
ctgcccatggagccggttgaaggagtggaatttatccagggcgatttttcgaatgacgaa
gttctgaatacactgctagagcacatatcttcgaacaaggcagactgggtcatttctgat
atggcgcctaatatgagtggtaacgaaagtattgatattccccgttccatgtatctttct
gaattggctctggatttcgctctgcgcgtgttggctcctggaggagggtttttaatcaag
gcctttcaaggggagggcatagatgcttttcttgctgaaataaagcgcaatttcaagtcg
gttgttattcgtaaaccaaaagcatctcgtgaccgctcccgggagatttatattttggcg
cgagaactgaagcggggagtggaatga
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