Aquicella siphonis: AQUSIP_18990
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Entry
AQUSIP_18990 CDS
T06267
Symbol
xthA
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
asip
Aquicella siphonis
Pathway
asip03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
asip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AQUSIP_18990 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asip03400
]
AQUSIP_18990 (xthA)
Enzymes [BR:
asip01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AQUSIP_18990 (xthA)
DNA repair and recombination proteins [BR:
asip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AQUSIP_18990 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
UCP032899
Motif
Other DBs
NCBI-ProteinID:
VVC76582
UniProt:
A0A5E4PJS7
LinkDB
All DBs
Position
1:complement(2010759..2011538)
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AA seq
259 aa
AA seq
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MRLFKIATWNVNSLRVRLPHVLAWLKEAKPDVLALQETKLPDADFPSAAFIDAGYDAVFS
GQRTYNGVAVISRTKPTDILTDLPGLEDPQRRVLGMVAGDIRVLDLYVPNGESVNSEKYQ
YKLNWLKKLDLFLKRELQKHPRMIVLGDFNIAPEDIDVHDPALWEGQVLFSVPERKAFKS
LLQLGFADCFRQINPQEKSYSWWDYRMNAFRRGMGLRIDHILASVPLASQCVKCYIDKSQ
RGLERPSDHAPVVAEFRLT
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcgactatttaagattgcaacctggaatgtcaattcattacgtgttcgtcttccacat
gtgcttgcgtggctaaaagaggcaaagcctgacgtgcttgctctgcaggaaaccaaattg
ccagacgcggattttccttctgcggcatttattgatgcgggttatgacgcggtattttct
ggccagcgcacatacaatggcgtcgctgttatcagccggacaaagccaacggatattctg
acggacttgccaggacttgaagatccgcagcgcagggttttgggcatggttgctggcgat
attcgcgtcctggatttgtatgtgcccaatggtgaaagtgtcaattctgaaaaataccaa
tacaaattgaactggcttaaaaaactggacttgtttttaaaacgggaactgcaaaaacac
cccagaatgatcgtgttgggagattttaatattgccccggaagacatagatgtgcacgat
cctgctctttgggaagggcaagtgttgtttagcgtgcctgagagaaaagctttcaagagt
ttattgcagctggggtttgctgattgtttcaggcagattaacccgcaggaaaaaagttat
tcctggtgggattatcgtatgaatgcattccggcgcggcatgggactgcgcattgaccat
attcttgcaagcgtcccgctggcatcgcaatgtgtcaaatgttacatcgataaatcccag
cgcgggctggagcgcccgtctgatcatgcgccagttgttgctgagtttcgtctgacataa
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