Aquicella siphonis: AQUSIP_20520
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Entry
AQUSIP_20520 CDS
T06267
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
asip
Aquicella siphonis
Pathway
asip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AQUSIP_20520 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asip03019
]
AQUSIP_20520 (groL)
03110 Chaperones and folding catalysts [BR:
asip03110
]
AQUSIP_20520 (groL)
03029 Mitochondrial biogenesis [BR:
asip03029
]
AQUSIP_20520 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
asip04147
]
AQUSIP_20520 (groL)
Enzymes [BR:
asip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AQUSIP_20520 (groL)
Messenger RNA biogenesis [BR:
asip03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AQUSIP_20520 (groL)
Chaperones and folding catalysts [BR:
asip03110
]
Heat shock proteins
HSP60 / Chaperonin
AQUSIP_20520 (groL)
Mitochondrial biogenesis [BR:
asip03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AQUSIP_20520 (groL)
Exosome [BR:
asip04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AQUSIP_20520 (groL)
Exosomal proteins of other body fluids (saliva and urine)
AQUSIP_20520 (groL)
Exosomal proteins of breast cancer cells
AQUSIP_20520 (groL)
Exosomal proteins of colorectal cancer cells
AQUSIP_20520 (groL)
Exosomal proteins of bladder cancer cells
AQUSIP_20520 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_GP20
KH_PARP14_2
Motif
Other DBs
NCBI-ProteinID:
VVC76727
UniProt:
A0A5E4PJW8
LinkDB
All DBs
Position
1:2184250..2185887
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKELRFSEDARQLMLAGVRELADAVQITMGPRGRNVVIDKSFGAPLVTKDGVTVAKEI
EFKEKFKNMGAQMVKEVASHTSDEAGDGTTTATVLARQIFVEGLKAVVAGYNPMDLKRGI
DKAVVAAVEQLKKLSVPCKDDKAIAQVGTISANSDEEIGRIIADAMAKVGKEGVITVEEG
SGLNNELDVVEGMQFDRGYQSPYFVTNQQNMSAELDNPLIFITDKKISSIRDFIPVLEAV
AKSGRPLLIIAEDVEGEALATLVVNHMRGIVKVCAVKAPGFGDRRKEMLQDIAILTKGQV
IAEEVGRTLESTTLQDLGSAKRVHITKDNTTIIDGAGDKKDIQDRVKQLRARMEETTSDY
DREKLQERVAKLAGGVAVIKVGAASEIEMKEKKARVEDALHATRAAVEEGVVPGGGVALI
RVMQSLKNTKGDNEAQTVGVQLICRALEAPVRQIVGNAGYEASVVLNKIVEGKGNYGFNA
ASGEYGDMLDMGILDPTKVTRTALQQAASVAGMMITTECMITELPKEEAPMGGHGGGMGG
MEGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaattacgattcagcgaagatgcccgccaactcatgcttgccggcgtg
agagaactggccgatgccgtacaaatcaccatgggcccgcgcggtcgcaatgtggtgata
gacaaatcctttggtgctccgctggtcaccaaagacggcgtaaccgttgccaaagaaatt
gaattcaaggaaaaattcaaaaacatgggcgcccagatggtcaaggaagtggcttcccat
acgtctgatgaagctggcgacggcaccaccaccgccaccgtgttagcccggcaaatcttc
gtcgaaggtttgaaggccgttgttgccggctacaaccccatggatttgaagcgcggcatt
gataaagctgttgtcgccgccgtcgagcaattgaaaaagctgtccgtgccttgcaaggat
gacaaagccatcgcgcaagtcggcaccatttccgccaactccgatgaagaaatcggccgc
atcattgcggatgccatggcgaaagtcggcaaggaaggcgtcatcacggttgaagaaggc
tccggcttgaataacgaactcgacgtggttgaaggtatgcagtttgaccgcggctaccaa
tcgccatacttcgtcaccaaccagcaaaacatgtctgccgagctggacaacccactaatc
ttcatcaccgacaagaagatttcctcgattcgcgatttcattcccgtgctcgaagccgtt
gccaagtcaggccgccccttgttgatcattgctgaagacgtggaaggcgaagcgctggcc
actctcgtggtcaaccacatgcgcggcattgtgaaagtctgcgccgtgaaagcaccgggc
tttggtgaccgccgcaaggaaatgctgcaagacatcgctatcctgaccaaaggccaggtc
attgccgaagaagtgggccgcacgctggaatccaccaccctgcaggatctgggatccgca
aaacgcgtacacatcaccaaggacaataccaccatcattgatggcgccggtgacaagaaa
gacatccaggaccgcgtcaagcaattaagagcccgcatggaagaaaccacttccgattac
gaccgcgaaaaactgcaggaacgcgttgccaaactcgctggcggcgtggctgttatcaag
gttggcgcagcttccgaaatcgaaatgaaggaaaagaaagcccgcgttgaagacgcattg
cacgcaactcgcgcagcagtcgaggaaggcgtggtgcctggcggcggcgtcgcattgata
cgcgtgatgcagtcactcaaaaacaccaagggtgacaatgaagcgcaaaccgtgggcgta
cagctgatctgccgcgctctcgaagcgcctgttcgtcaaatcgtcggcaatgccggctac
gaagcttccgttgtcctcaacaagattgttgaaggcaaaggcaattacggcttcaatgcc
gcgtccggcgaatatggcgacatgctggacatgggcatcctggatcccaccaaggtgaca
cgcaccgcgctgcaacaggctgcatccgttgccggcatgatgatcaccaccgagtgcatg
atcaccgaactgccaaaagaagaagcccctatgggtggacacggcggcggaatgggcggc
atggaaggcatgatgtaa
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