Aquicella siphonis: AQUSIP_20720
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Entry
AQUSIP_20720 CDS
T06267
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
asip
Aquicella siphonis
Brite
KEGG Orthology (KO) [BR:
asip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asip03016
]
AQUSIP_20720 (truB)
Enzymes [BR:
asip01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AQUSIP_20720 (truB)
Transfer RNA biogenesis [BR:
asip03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AQUSIP_20720 (truB)
Prokaryotic type
AQUSIP_20720 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
SutA-RBD
TruB_C
Motif
Other DBs
NCBI-ProteinID:
VVC76747
UniProt:
A0A5E4PJY9
LinkDB
All DBs
Position
1:complement(2207395..2208324)
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AA seq
309 aa
AA seq
DB search
MRRQIHGILLLDKPSGMTSNGALQRIKRLFCAKKAGHTGSLDPIATGMLPLCFGEATKFS
QFLLDSDKAYYVVAKLGIRTTTGDTEGEIVETRPVLNVTRQAIEEAMSQFLGEIEQIPPM
FSAIKVQGKPLYELARRGIEVERKPRCVKIFSLILDNFESGEIIFRVHCSKGTYIRTLVE
DLGAVLGCGAHVTALRRAAVSPYGHSLMYTMPALESIAENGGINALLSCLLPVETAVQSF
PAVQLSTSAAFYLRMGQPVRANFPLNSTMVRLISEDARFLGMGEVMPDGRVKPHRLLAVQ
DIAMDSTGT
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaggcagatacacggtattcttttgctggataagccctccggcatgacttcaaat
ggcgctttgcagcgaatcaaacggttgttttgcgccaaaaaggctgggcacacgggaagt
ttggatcccatcgcaacaggcatgctccctctatgctttggcgaagcgactaaattttca
caatttcttctggattcggacaaggcatattatgtcgttgccaagctggggattcgcacc
acgacaggtgataccgagggtgaaattgtggaaaccaggccggtattgaatgtgacaaga
caggcaattgaagaagcgatgtcgcagtttctaggtgaaattgaacagatcccccccatg
ttttccgcgattaaagttcagggtaagccgttatacgaactcgcgcgccgcgggattgaa
gttgaacgcaagccccgatgcgtcaagattttttccctgattctggacaattttgaaagc
ggcgaaatcatttttcgcgtgcactgcagcaaggggacttatattcgcacgctggtggaa
gaccttggcgctgttttaggctgtggtgcgcatgtgacggccttgcgtcgagcggcagtc
tcaccttatggtcattctcttatgtataccatgccggcgctcgaatccatcgcggaaaat
ggcggcattaatgcattgttgtcatgcctgttaccggttgagacggccgtgcaatcattt
ccagcagtgcagttatctacttcagcggcattttatttacgcatgggacagcctgtcagg
gcgaatttcccgcttaacagtactatggttagactgatatcagaagacgcccgctttctt
ggcatgggtgaagttatgccagacgggcgcgtcaaaccacatcgcctgcttgcggttcag
gatatcgccatggatagtaccgggacctga
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integrated database retrieval system
