Aquicella siphonis: AQUSIP_22090
Help
Entry
AQUSIP_22090 CDS
T06267
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
asip
Aquicella siphonis
Pathway
asip00300
Lysine biosynthesis
asip00470
D-Amino acid metabolism
asip01100
Metabolic pathways
asip01110
Biosynthesis of secondary metabolites
asip01120
Microbial metabolism in diverse environments
asip01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
asip00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AQUSIP_22090 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AQUSIP_22090 (dapF)
Enzymes [BR:
asip01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AQUSIP_22090 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
VVC76882
UniProt:
A0A5E4PKV6
LinkDB
All DBs
Position
1:2344899..2345768
Genome browser
AA seq
289 aa
AA seq
DB search
MPPFNRRLVPFTKMHGLGNDFAVIYTPDNSLSLDPGFISRLANRHIGIGFDQLLLIETSA
RADFFCRIYNADGSEAEQCGNGLRCVARLIHEQGLSKDRQFEIETRAGIFSLQVYDYDHI
QIIMGTPQIESAMIELELPDTHRHLPISILSMGNPHAIIKVDSLITAGIEELAPRISAHS
RFPEGVNIGFMQVLSKHHIRLRTHERGSGPTLACGSNACAAVAAGIANGWLNQSVNVEFE
YGSLDIEWQGDGHTIKMTGPAVTVYTGEISLPIMSDEKRPDNESGLSQS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcccccattcaatcgccgcctcgttccattcaccaaaatgcacggtctgggtaacgat
ttcgctgtcatttatacgccagacaattctctttctctggatccgggcttcatttcacgt
ctggcgaatcgccatataggcataggctttgaccagctgctgctgatagaaacttctgcg
cgcgctgattttttctgtcgaatctataatgctgacggcagtgaagccgaacagtgcggc
aacggcttacgctgtgttgcccgcctgattcatgaacaaggcctgagcaaagaccgacag
tttgaaatcgagacccgggcaggcatattttcgcttcaggtttacgattacgatcatata
caaataatcatgggaacaccccagatagaatctgccatgattgagcttgaactgcccgac
acacataggcacctcccgatcagcattctttccatgggtaatccgcatgccatcatcaag
gtagactccctgattaccgccggaattgaagagcttgcaccccggatttctgcccattct
cgctttcctgaaggtgtaaatataggatttatgcaagttctcagcaaacatcatatccgc
ctgcgcacgcatgagaggggaagcggcccgactctggcttgtggaagcaatgcctgcgcc
gctgtcgccgctggtattgctaacggctggctaaatcagtctgtcaatgttgagtttgaa
tatggatctctggatatcgaatggcaaggggacggccacactatcaaaatgaccggtccc
gcggtaaccgtctatacaggtgaaataagcttgcccattatgtctgatgaaaaaaggcct
gataatgagtcaggcctttcgcaatcatga
DBGET
integrated database retrieval system