Aquicella siphonis: AQUSIP_22580
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Entry
AQUSIP_22580 CDS
T06267
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
asip
Aquicella siphonis
Pathway
asip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AQUSIP_22580 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asip03019
]
AQUSIP_22580 (pnp)
03016 Transfer RNA biogenesis [BR:
asip03016
]
AQUSIP_22580 (pnp)
Enzymes [BR:
asip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AQUSIP_22580 (pnp)
Messenger RNA biogenesis [BR:
asip03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AQUSIP_22580 (pnp)
Transfer RNA biogenesis [BR:
asip03016
]
Prokaryotic type
tRNA degradation factors
AQUSIP_22580 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
VVC76931
UniProt:
A0A5E4PKJ5
LinkDB
All DBs
Position
1:complement(2397999..2400128)
Genome browser
AA seq
709 aa
AA seq
DB search
MTVITKTFRYGNHNVTLETGRIARQATAAVLVSMDDTVVLVTAVGADSASDDKDFFPLTV
NYQERTYAAGRIPGGYFKREGKPSEKETLTSRLIDRPLRPLFPKGFNFEVQVIATVLSMN
PDIDADIPAMLGASAAIALSGMPATSHLAAARVGYMDGNYILNPTLSQLESSQLDMVVAG
TENAVLMVESEAKELPESVMLGAVMFAHREMQTAINAIKELAKEAGTVNWEWAPPVPNAE
IEKRVVDLCKADIEKAYQIKDKIERQEAVSEIRDRILEQIITENAGKEDELALLADAKYV
FNSLERNVVRGRILQNQPRIDGRDTKTVRPISIQTGLLPRTHGSALFTRGETQALVVATL
GTERDAQTIDALEGERKENFMLHYNFPPYSVGEVGMVGSPKRREIGHGNLAKRGISAVLP
SQKDFNYVLRVVSEITESNGSSSMATVCGTSLALMDAGVPIKTHVAGVAMGLVKEGDQFA
VLTDILGDEDHLGDMDFKVAGTTEGVTALQMDIKIDGITETIMQRALEQARDGRMHILGI
MNQAITGPRQEMSAYAPRILTLRIPTDKIRDVIGKGGVTIRALTEETGTVVDISDDGMVK
VAAADLAACEEAISRIERLTADVVVGNIYEGTVTKLMDFGALVNILPGKQGLVHISQIAS
ERIANVSDRLSEGQIVRVKVLEIDRQGRIRLSMKEVEISPSSTANQSNG
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
ttgactgtaatcacaaaaacattccgttatggcaaccataacgttaccctggaaacaggg
agaatcgcccgccaggcaaccgcagcggtgctggtcagcatggatgacacggtcgtgttg
gtgacagccgtgggcgcagacagcgcatctgatgacaaagactttttcccgcttactgtt
aattatcaggagcgtacttatgcggcaggccggattcccggcggttatttcaagcgtgaa
ggcaagcccagcgagaaagaaacgctgacatcgcgcctgatcgacagaccgctgcgcccc
ctgttccccaaagggtttaattttgaagtgcaggtgatcgccaccgtgttgtccatgaat
ccggacatcgatgccgatattccagccatgctgggcgcgtctgcggcgattgctctttcc
ggcatgccggctaccagccatcttgctgcggcccgggtcggttatatggacggcaattac
attcttaatcctacactgtcccagttagagtcttcccaactggatatggtggtagccggc
acggaaaacgctgttctcatggtggaatccgaagccaaggaattgccagaatctgtcatg
ctgggcgcagtcatgtttgctcaccgcgaaatgcagaccgccatcaatgccattaaagaa
ttggcgaaagaggcaggtactgtaaattgggaatgggctccgccggtacccaatgcggaa
atcgaaaagcgtgttgtggatttgtgcaaggcagacatagaaaaagcctatcaaatcaaa
gacaagatcgaacgccaggaagcggttagcgaaatacgcgaccgtatcctggaacagatt
attactgaaaacgcgggcaaggaagacgagctggcgctgcttgcggatgccaagtatgtc
ttcaatagcctggagcgcaatgtggttcgcggccgaatcctgcaaaaccagcctcgtatc
gatggccgggatacaaaaaccgtccgccccatttccattcagaccggcttactgccccgc
acacacgggtccgcgctgtttacccgcggggaaacacaggcgctggttgtcgcgacactg
ggtacggaacgcgatgcgcaaaccattgatgcgctggaaggcgaacgcaaggaaaacttc
atgctgcattacaattttcccccttattcagtgggtgaagtgggaatggtaggcagtccg
aaacgccgtgaaatcggccacggaaatcttgccaaacgtggtatttcagccgttttgccg
tcacagaaagattttaattatgttttgagggtggtttctgaaatcacggaatccaacggt
tccagctccatggcaaccgtatgcggtaccagcctcgcgttaatggatgccggtgtgccc
atcaagacgcacgtggccggcgtggccatgggcttggtgaaagaaggtgaccagtttgcg
gtgttgaccgacattctgggcgatgaagaccatctgggtgacatggatttcaaagtcgca
ggaactaccgaaggtgtcacagccttgcaaatggatatcaaaattgatggcatcactgaa
accatcatgcagcgcgctctggaacaggcacgcgatggccgtatgcatatccttggcatt
atgaatcaggcgattaccggcccgcgccaggaaatgtcagcttacgcgccgcgcatcctg
accttgcgcatcccgacggacaagattcgcgatgttattggcaaaggtggtgtgaccatt
cgtgctttgaccgaagaaaccggcacagtcgtggatatcagcgatgacggcatggtcaaa
gtcgccgcggcggatcttgctgcgtgtgaagaagctatcagccgcatagaacgtttgacg
gcggatgtcgttgtcggaaatatctatgaaggcacggtgaccaagctgatggacttcggc
gcactggtgaatatcctgcctggtaaacaaggcctggtgcatatttcacagattgccagc
gaacgcatagccaatgtcagcgacagattgtctgaaggccagatagtgcgagtaaaagtc
ctggaaattgaccgtcagggccgtatccgcctcagcatgaaggaagttgaaatcagccct
tcttctacagccaatcaatccaacggataa
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