Aquicella siphonis: AQUSIP_24030
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Entry
AQUSIP_24030 CDS
T06267
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
asip
Aquicella siphonis
Pathway
asip02020
Two-component system
asip02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
asip00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AQUSIP_24030 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AQUSIP_24030 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asip03021
]
AQUSIP_24030 (rpoN)
Transcription machinery [BR:
asip03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AQUSIP_24030 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Arg_repressor
Motif
Other DBs
NCBI-ProteinID:
VVC77076
UniProt:
A0A5E4PLH0
LinkDB
All DBs
Position
2:complement(146966..148384)
Genome browser
AA seq
472 aa
AA seq
DB search
MSTKMLLTTKLDQRLAMNQQLSQAITLLQYNTLELKQVIQQYIETNPLIEVVEGETHDDT
DTVTSHTQDEEELSQLFRYSADLARNSYSYADDSTLENYSNPKTLREHLIEQTWLCKFNA
SQQLIAEAIIDAIDDNGWLSASIAEIQVSLSKEYAQDTGSFYNVLGKIQTFDPPGVGARD
LRECLLLQLDQYPDKHNAWNHARTIVSAYFELLASGQYKNLMKKMNLTSREYHDAMKIIR
SLNPKPGLLLSSDNNIQIEPELYVKKFRNSWRVFLSDSIMTRIRINQHYHELIKKNKKQD
SFQSLSKELQEAQWLLTGLKRRNETLLNVASHIIRLQNEFLDRGQAFMKPLNIVDVSQAL
DLHESTVSRVTTGKYIATPRGVFELKYFFPSYVLTHDGDSCSEIAVKEMIKEIVRTESGG
HIHSDSEIASLLKQKGIKIARRTVAKYRDALKISPSYQRSHEYAQTSFNNDS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgaaaatgcttttaacgaccaaacttgatcagcgcctggcgatgaatcagcaa
ttatcccaggcgatcaccctgctgcaatataacacgcttgagctcaaacaagtcattcaa
caatatattgaaaccaatcccctgattgaagtcgttgaaggcgaaacgcacgatgacact
gataccgtgacttcacacacgcaggatgaagaggaattatcccaattgttcaggtactcc
gctgatctggccaggaatagttattcttatgccgatgatagcacactggaaaattactca
aaccccaagacgctcagggaacatttgattgaacagacctggctgtgcaaattcaatgca
agccagcagttaatcgctgaagcaatcattgacgcaatcgatgacaatggatggctgtca
gcttcaatagccgaaattcaagtgtcgcttagcaaggaatacgcccaagacaccggatcg
ttttataatgtgcttggtaaaatccagacgttcgatcctccaggcgtcggagccagggat
ttgcgcgaatgcctgctcttgcagcttgaccagtatcccgacaagcataacgcatggaac
cacgcccgcactattgtcagcgcttattttgaattgctcgcatccggacaatataaaaat
ctcatgaaaaaaatgaatctgacaagccgggaatatcacgatgcgatgaaaattatccgg
tctctcaacccgaaaccaggactgttattgtcttccgacaacaacattcagatagaaccg
gaattatatgtaaaaaaatttcggaactcatggcgggtattcctgtctgacagtatcatg
acccgcattcgaattaatcagcattaccatgaattgatcaaaaaaaacaagaaacaggat
tcattccagtcattgtccaaagaattgcaggaagcacaatggctgttaacaggcttgaaa
agacgcaatgaaaccttgcttaatgtggcttctcatatcatcaggctgcaaaatgaattt
cttgatcgcggccaggcattcatgaagcctctcaatatagttgatgtttcacaagcccta
gacttgcatgaatcaactgtctctcgcgtgaccacaggaaaatatattgcaacaccaaga
ggcgtttttgagttgaaatattttttccccagttatgtcttgacacatgatggcgacagt
tgttcggaaattgccgtcaaggaaatgatcaaggaaattgtgcgaacagaatccggcggc
catatacatagtgatagtgaaattgcgtcattgctaaagcaaaaaggcatcaaaatcgcg
agacggactgtcgcgaaataccgggatgcgttgaaaatatctccatcatatcaacgttcg
catgaatacgcacaaaccagttttaacaatgattcctag
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