Aliirhizobium terrae: N7E02_09645
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Entry
N7E02_09645 CDS
T10453
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
asit Aliirhizobium terrae
Pathway
asit03420
Nucleotide excision repair
asit03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
N7E02_09645
03430 Mismatch repair
N7E02_09645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asit03400
]
N7E02_09645
Enzymes [BR:
asit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N7E02_09645
DNA repair and recombination proteins [BR:
asit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N7E02_09645
MMR (mismatch excision repair)
Other MMR factors
N7E02_09645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
HHH
Peptidase_M2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WJH40816
LinkDB
All DBs
Position
317582..319651
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AA seq
689 aa
AA seq
DB search
MSVAYLEKLNDAQRRAVEHGSEVPNGGPAGPLLVIAGAGSGKTNTLAHRVAHLIVSGADP
RRILLMTFSRRAASEMGRRVERICKQVLGAKAGIMTDALAWAGTFHGIGSRLLRIYAYQI
GLDPDFTIHDREDSADLMNLVRHELGFSKMESRFPTKGTCLAIYSRAVNSETPLDEVLKT
WFPWCQAWEPQLRELFASYVEAKQTQNVLDYDDLLLYWAQMMSEPSIAEDVGARFDHVMV
DEYQDTNRLQSSILMGMKPGGRGLTVVGDDAQSIYSFRAATIRNILDFPNTFDPPANIVT
LDRNYRSTSTILAAANGVIELARERFTKNLWTDRQSEERPRLVAVKDETEQANYIVEKVL
ENRETGMTLKQQAVLFRASHHSGPLEVELTRRNIPFVKFGGLKFLDSAHVKDMLAALRFA
QNPRDRVAGFRLMQLIPGIGPQTAGKILDAMASDPEPLAALQEIPAPPRSGADWPAFVEM
LTAIRRNEGWPAEIGTAREWYQPHLERVHEDAETRKADLLQLEQIASGYASRERFLTELT
LDPPDATSDQAGVPLLDEDYLILSTIHSAKGQEWRSVFLLNCVDGCIPSDLGVGSTAEIE
EERRLLYVAMTRAKDHLHVITPQRFFVHGQHSQGDRHVYAARTRFIPATLLQFFETSAWP
VVAPMSDEERRHRQQVRIDVTARMRGMWR
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcgcctatctggaaaaactcaatgatgcccagcgtcgcgcggtggagcacggc
tccgaagtgcccaacggcggcccggccgggcctctgctggtcatcgccggcgccggttcc
ggcaagaccaacacgctcgcccaccgcgtcgcccacctgatcgtctcgggcgccgacccg
cgccgtatcctgctgatgaccttttcccgccgcgccgcatccgaaatgggccgccgcgtc
gagcgcatctgcaagcaggtgctgggcgcaaaggccggtatcatgaccgacgctctcgcc
tgggccggcaccttccacggcatcggctcgcggctgttgcgcatctacgcctaccagatc
ggcctcgacccggatttcaccatccacgaccgggaggattccgccgacctgatgaacctc
gtgcgccacgaactcggcttctccaagatggaaagccgctttccgaccaagggcacctgc
ctcgccatctattcccgcgccgtcaattccgagacgccgctcgacgaagtgctgaagacc
tggttcccctggtgccaggcctgggagccgcagctgcgtgaactcttcgcgtcctatgtc
gaggccaagcagacccagaacgtgctcgattacgacgacctgctgctctactgggcgcag
atgatgagcgagccgtcgatcgccgaggatgtcggcgcccgtttcgatcacgtcatggtc
gacgaataccaggacaccaaccggcttcagtcctccatcctgatgggcatgaagcccggc
ggccgcggcctcaccgtcgtcggcgacgatgcccaatcgatctattccttccgcgccgcg
acgatccgcaacattctcgatttcccgaacacattcgatccgccggccaatatcgtcacg
ctcgaccgcaactaccgatcgaccagcaccatcctcgccgccgctaatggcgtgatcgaa
cttgcccgcgagcgcttcaccaagaacctctggaccgaccgccagtccgaagaacgcccc
cgcctcgtcgccgtcaaggacgagacggaacaggccaattacatcgtcgagaaggtgctg
gaaaaccgcgagaccggcatgacgctgaaacagcaggccgtgctattccgcgcctcgcat
cattccggcccgctggaagtagaactcacccgccgcaacattcccttcgtcaagttcggc
ggcctgaagtttctcgacagcgcccatgtgaaggacatgctggccgcgctgcgtttcgcc
cagaaccctcgcgaccgcgtcgccggtttccggctgatgcagctcatccccggcattggc
ccgcagaccgccggcaagattttggatgccatggcatccgaccccgagccgctggcggca
ttgcaggaaatccccgctccgccgcgatccggtgccgactggcccgccttcgtcgagatg
ctgaccgcgatccgcaggaacgagggctggccggccgagatcggcaccgcccgcgaatgg
taccagccgcatctggaacgcgtccacgaggatgccgaaacccgcaaggccgacctcttg
cagctcgaacagatcgcctcgggctacgcgtcccgcgaacgcttcctcaccgaactgacg
ctcgacccgccggatgcgacgagcgaccaggccggcgtgccgctgctcgacgaggactat
ctcatcctctcgaccatccattctgcaaaaggccaggaatggcgctcggtcttcctgttg
aactgcgtcgacggctgcattccctcagacttgggcgtcggctcaaccgccgagatcgag
gaagagcgccggctgctctacgtggcaatgacccgcgccaaggaccatctccatgtcatc
accccgcagcgcttcttcgtccacggccagcattcccagggtgaccgccacgtctatgcc
gcccgcacccgctttattccggcaacactgctgcagttcttcgagacatccgcctggccg
gtcgtcgcaccgatgtccgatgaggaacgccgccaccgccagcaggtcaggatcgacgtg
acggcaaggatgcggggcatgtggcgataa
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