Acinetobacter schindleri: AsACE_CH00252
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Entry
AsACE_CH00252 CDS
T04787
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
asj
Acinetobacter schindleri
Pathway
asj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
asj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AsACE_CH00252 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asj03021
]
AsACE_CH00252 (rpoC)
03400 DNA repair and recombination proteins [BR:
asj03400
]
AsACE_CH00252 (rpoC)
Enzymes [BR:
asj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AsACE_CH00252 (rpoC)
Transcription machinery [BR:
asj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AsACE_CH00252 (rpoC)
DNA repair and recombination proteins [BR:
asj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AsACE_CH00252 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
APX61699
LinkDB
All DBs
Position
264693..268892
Genome browser
AA seq
1399 aa
AA seq
DB search
MKDLLDIMRKKTDSDGHAPVEFDRIRIGLASPEMIKSWSHGEVKKPETINYRTFKPERDG
LFCAKIFGPVKDYECLCGKYKRMKYKGVICEKCGVEVTTAKVRRERMGHIELASPVAHIW
FLKSLPSRIGLLLDMTLRDIERVLYFESYVVTDPGMTPFEKYQLLNDEEYFNALEEHGDE
FTAKMGAEAVQDLLKDIDLEAEISRLREEIPVTTSETKLKKASKRLKLMEAFKESNNKPE
WMVMNVLPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNE
KRMLQESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVI
TVGPNLRLHQCGLPKKMALELFKPFIFAKLQASGQATTIKAAKKMVERETPEVWDVLASV
IRQHPVMLNRAPTLHRLGLQAFEPILIEGKAIRLHPLVCAAFNADFDGDQMAVHVPLTLE
AQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYITRDAINAKGEGMVFADTHEVNR
ALATGQVDLHARVKARVHQTVIDEDGNRRQETIIVDTTPGRCLLWEVVPEGMDFQQINVE
MTKKNISKLINSCYRKLGLKDTVIFADQLMYLGFRQATRSGVSVGMEDMLIPPNKQAIIG
KAEAEVREIEQQFEQGFVTAGERYNKVVDIWARTNDQVAKAMMDNLSYTTVKNKQGEDEK
QKSFNSIYMMSDSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIKANFREGLTVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVAQDLVITEPDCGTYDGLVMTPFIQGGDVIENL
GTRVLGRVVAEDVKKVGTDEVLLPRNTLIDEKLATFIENAGIDEIKVRSVVNCASTFGVC
AKCYGRDLARGHQVNPGESVGVMAAQSIGEPGTQLTMRTFHVGGAASRTSAANSVQVRNK
GTVRFHNVKTVQHAKGHLVSTSRSGEIGIADDLGRERERYKIPYGASILLKDGEAVEAGG
IVATWDPHTHPLVTEVAGKVRFSQIADGVTATSKTDDATGMTTVEILPVTARPASGKDLR
PAVVLDTVDGGEQFYFLPQNTILSVRDGETIGVGDVIGRVPQESSRTRDITGGLPRVADL
FEARKPKEHAILAEVSGIVSFGKETKGKNRLVITPDDGSEIYEELIPKWRTINVFEGEHV
NRGETISDGPQNPHDILRLKGEVALTNYIVNEVQDVYRLQGVKINDKHIEVIVRQMLRKV
EITDGGDSSFIKGEQVDYIRVAQENQALLAQNKFPAKFERQLMGITKASLSTDSFISAAS
FQETTRVLTEAAVTGKEDDLRGLKENVVVGRLIPAGTGLAYHLERRRQEAEAAEFELHND
FSDVDQALSQAFNDEFNGL
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagacttgctcgatatcatgcgcaaaaagacggattcagacggtcatgctccagta
gagtttgatcgcatccgtattggtcttgcgtcaccagaaatgattaagtcgtggtctcat
ggtgaagttaaaaagcctgaaaccatcaactaccgtacattcaagccagaacgtgatggt
ttattctgtgccaaaatctttggtccagtaaaagattacgaatgcttgtgtggtaaatac
aagcgtatgaaatacaaaggcgtcatttgtgaaaaatgtggcgttgaagtaacaactgca
aaagttcgtcgtgaacgtatgggtcacatcgagctggcttctccagttgcacacatctgg
ttcctgaaatcactacctagccgtatcggtcttttattagacatgacgctacgtgatatc
gaacgcgtattgtatttcgaatcttacgttgtaaccgatcctggtatgactccatttgag
aaataccagcttctaaatgatgaagagtacttcaatgccttagaagaacacggtgacgaa
ttcacagcgaaaatgggcgcggaagcagttcaggacttgttgaaagacatcgatcttgaa
gccgaaatttctcgcctgcgtgaagagattcctgtaacaacttctgaaactaagttgaaa
aaagcgtctaagcgtttgaaacttatggaagcgttcaaagaatcgaacaacaagccagaa
tggatggtaatgaacgtacttccagtacttccaccagatcttcgcccccttgtgccactt
gaaggtggtcgtttcgcgacttctgatttgaacgacctttaccgtcgtgtgatcaaccgt
aacaaccgtttgaagcgtcttcttgaccttgcagcgccagacattatcgtacgtaacgaa
aaacgtatgttacaagagtctgtagatgcattgttagacaacggtcgtcgtggtcgtgca
attaccggttcgaacaagcgtcctcttaaatctttggcagacatgatcaaaggtaaacaa
ggtcgtttccgtcaaaacttacttggtaagcgtgttgactactcgggtcgttcggtaatt
actgtaggtccaaacctacgtcttcaccaatgtggtcttccgaagaaaatggcacttgaa
ctgttcaagccatttatctttgcgaaactacaagcctctggtcaagcgactaccattaaa
gctgcaaagaaaatggttgagcgcgaaactccagaagtttgggacgtgcttgcatctgtg
atccgtcaacatccagtgatgttgaaccgtgcgccaacacttcaccgtctaggtcttcaa
gcgtttgaacctattctgattgaaggtaaagcgatccgtcttcacccgttagtttgtgcg
gcatttaacgccgacttcgacggtgaccaaatggcggtacacgtaccattaacactcgaa
gctcagttagaagctcgtgcattaatgatgtcaaccaacaacatcttgtctccagcgaac
ggtgaaccaatcatcgtaccgtctcaggacgttgtgttgggcttgtattacatcacacgt
gatgcaatcaatgccaaaggtgaaggcatggtgttcgcggatactcatgaagtaaaccgt
gcacttgcaactggtcaggttgatctacatgctcgcgtgaaagcacgtgtacaccaaact
gtgattgatgaagatggcaaccgtcgtcaagaaaccatcattgttgatacaacccctggt
cgctgcttgctttgggaagttgttcctgaagggatggacttccagcaaattaacgttgag
atgaccaaaaagaacatctcgaagttaatcaactcttgctaccgtaaactgggtctgaaa
gatactgttattttcgctgaccagttgatgtacctaggcttccgtcaagcgacacgctct
ggtgtatctgttggtatggaagacatgctgattccaccaaacaaacaggcaattattggt
aaagctgaagctgaagttcgtgaaatcgaacagcagttcgaacaaggtttcgtgactgcc
ggtgaacgttataacaaagttgtcgatatctgggcacgtaccaacgaccaggtagcgaaa
gcaatgatggacaacttgtcttacacgactgttaagaacaaacagggtgaagatgagaaa
cagaaatcattcaacagcatctacatgatgtctgactccggtgcccgtggttccgcagct
cagattcgtcaattggctggtatgcgtggtctgatggcgaagccggatggctcgatcatt
gaaacgccaattaaagcgaacttccgtgaaggtctgacagtacttcagtacttcatttca
acacacggtgcgcgtaaaggtttggctgatacagcactgaaaactgcgaactctggttac
ctgactcgtcgtctggtagacgttgcgcaagacttggtcatcactgagccagattgtggt
acttatgatggtcttgtaatgacgccgttcattcaaggcggtgacgtgatcgagaacctg
ggtactcgagtactgggtcgtgtcgttgctgaagacgttaagaaagtgggtacagacgaa
gttcttcttcctcgtaacacgttaattgacgagaaactggctacgttcattgaaaacgcg
ggtattgacgaaatcaaagtacgttcagttgtaaactgtgcctctactttcggtgtatgt
gcgaaatgttacggtcgtgacttggcacgtggtcatcaagtgaaccctggtgaatctgtg
ggtgtaatggctgctcaatcaattggtgagccaggtacacagttaaccatgcgtacgttc
cacgtgggtggtgctgcgagccgaacttctgctgcaaatagcgtacaagttcgtaacaaa
ggtactgtacgtttccacaatgtgaaaactgtacaacacgcgaaaggtcacttggtatca
acttcacgttcaggtgaaatcggtattgcagatgatctaggtcgtgagcgtgaacgttac
aagatcccttacggtgcgtctattctgctgaaagatggcgaagctgtagaggctggcggt
atcgtggcgacttgggatccgcatacacatccactggtaacagaagtagctggtaaagtt
cgcttcagccagattgctgatggtgtaactgcaacatcgaaaactgatgatgcaactggt
atgacgactgttgagatcttgcctgttacagcgcgtcctgcttctggtaaagatttacgt
cctgctgttgtgcttgacacagtagatggtggcgaacagttctacttcctgccacaaaac
acaattctttctgtccgtgatggcgaaaccattggcgtgggtgatgtaatcggtcgtgta
ccacaagaatcttcacgtacgcgtgatattaccggtggtctgccgcgtgtagctgacttg
ttcgaagcacgtaagccgaaagaacatgcgatccttgcagaagtgtctggtatcgtaagc
ttcggtaaagagaccaaaggtaagaaccgtctggtaattactccggatgatggttcagag
atctacgaagagcttattccgaaatggcgtaccattaacgtgttcgaaggcgaacatgtg
aaccgtggtgaaacgatttctgatggtccacagaacccgcatgacatcttacgtctgaaa
ggtgaagtggcgttgaccaattacatcgtgaatgaagttcaagacgtttaccgtctgcaa
ggtgtaaaaatcaacgataagcacatcgaagtgatcgtacgtcaaatgttgcgtaaagtt
gaaatcactgatggtggtgattctagcttcatcaaaggcgaacaggtggattacatccgc
gttgctcaagagaaccaagcattgcttgctcagaacaagttccctgcgaagtttgaacgt
caattgatgggtattaccaaagcgtcactttctactgattcgttcatctctgctgcatcg
ttccaggaaacaactcgtgtgttaactgaagcggctgtaacaggtaaagaagatgatcta
cgcggtctgaaagaaaacgtagttgtaggtcgtctgatcccagcgggtacaggtctggct
taccacttggagcgtcgtcgtcaagaagcagaagctgcagaatttgaactgcataatgac
ttctctgatgtagaccaagcgcttagccaagcatttaatgatgagtttaacggtctgtaa
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integrated database retrieval system
