Acinetobacter schindleri: AsACE_CH00285
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Entry
AsACE_CH00285 CDS
T04787
Name
(GenBank) exodeoxyribonuclease V beta subunit protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
asj
Acinetobacter schindleri
Pathway
asj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AsACE_CH00285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asj03400
]
AsACE_CH00285
Enzymes [BR:
asj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AsACE_CH00285
DNA repair and recombination proteins [BR:
asj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AsACE_CH00285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_22
NPHP3_N
UPF0184
Motif
Other DBs
NCBI-ProteinID:
APX61732
LinkDB
All DBs
Position
302634..306752
Genome browser
AA seq
1372 aa
AA seq
DB search
MTIAPQQQHKTSTNPIQDMTFTGLHWIEASAGTGKTYTLSSLMVRIFLDKYYPHQVIATT
FTRKATAELKSRVRARVEETLRYIQRYQHLNSVEMTQKIEQESDPLLQKVLQDYGSRMDY
ARRRLGLVLNQLDELFVGTLDSFSQKLLREFAFESGRIERAELTEDQDLYIQQLIHDVLR
EWIQQQPQYVINQMYLQNQLKAPEHYVGLVRDALNFSANHFQSVRQVEWDLGELDACIEQ
LVNISPAELLKIQTYCAETPKYFHKNFHAKLSEICSNFSDWAVQLSEQKGMCFFDPELCK
LVLKLCYLLRNKTDFQPAKQRFTKSCSEEEQQYFLSHPLICAIEALCNVKQALDEKFKQL
TAYLEYHLIRSVQHRLPQTLQKQGETTFSQQIRTLTEALQGEQGRRFAQFVQSRYPLILV
DEFQDTNQDQDDLLARIWRDAARVQLGCMIMVGDPKQAIYGFRGGDMLTYNKAHADVRLK
QGHEYTLTQNHRSVKALVEVVDALFQRRMDFGESVNYSLIQAGSRPHPDLIDSGQANPYP
LRWMQLGEQEHEADQVAWKIRELLNQSAQQQLYFQQQESSAPLTEDDIAVLSFGHYALEQ
VKQRLQRTGIACYKESKQSVFASNVAQDVAAVLTAIMDPFNEAKVRRALVTRLLGFDLKK
LLELQQQPVGLSTFIADFEVIREMWFDKGFLSAWNYALNLFDVWTNLVSSQSIDNERVVV
NLRHLTEILSQQSEYYQGAQKLYYWYLRQLQSPSGKDSEKERKLSGDRGVQLLTIHASKG
LEFKIVFLMGADAPFDVNKGNLNFSLAGHEQDDILNQSRVIAVNREDLHEQAQLQNAARN
AAENHRLWYVALTRASHRVYAMLQDQSGQSDSCLAYWRGQGEQVFQHPLSCMENTLTAAP
PRIAVERMQTALELVAHPLPEQQFYPRTKTSFTALSRHQLHVTVLQDDLVSLYEHPESAA
DEIHLQTEAEVLQQPLDWIKLNFPKGTVAGTFLHSIFEHLDFQDSSYWNLEIRRRFKNTA
PHIWMELKDQFQQDFQILQRLQQAFQQYYLQATINLNTLFKRVASNASLKAGALAEAILH
VMASINYKLLTGIRLHDQSVAYRHTWHSFFQQPSLDVTHFLQFMTQFERYFLELDDDAFI
QQFEQEMGQLPKASTHENLDVTRLMQQSANLFFEELSEDILLNLMHDWVGEILNTPIQSE
FRLSQLDQHSFLSEFPFYLALNDAPLQIRQIQQLFVDYGLIMPDFNEAKSARYLTGAIDL
VYFDGQRYHIADYKSNYLGANQQDYLPEAIHDSMTHSSYWLQAALYLVAMHRYLSANLQG
YDIRQHLGGATYLYLRGMNGQAGQGLYHWQPEVEFIQKLDHILGYYAVNKSA
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgcccctcaacagcaacataaaacttcaaccaatccaattcaggacatgacc
tttactggtctgcactggatcgaggcttcggcagggactggcaaaacctataccctgtct
agcctgatggtgcggatttttctagataaatactatccacatcaggtcattgcgacgacg
tttacccgtaaggcaacagctgaactgaaaagccgggtacgcgcacgtgtggaagaaact
ttgcgttatatccagcgctatcagcatcttaattcggtagaaatgactcagaaaatcgag
caggaatctgatccgttgttgcagaaagtgctgcaagattatggcagtcgtatggattac
gctcgccgtcgtctggggctggtattgaaccagctggatgaactgtttgtcggcacgctg
gacagttttagtcaaaagttactgcgtgaatttgcttttgaaagtgggcggattgaacgt
gctgaactgactgaagatcaggacctgtatattcagcagctgattcatgatgtgctacgg
gaatggatccagcagcagccgcagtatgtcattaaccagatgtatttacagaaccagctc
aaagctcctgaacactatgtggggctggtacgtgatgcactcaattttagcgccaatcat
ttccaatcagtccgccaagtagaatgggatttgggtgaactggatgcctgtattgagcag
ctggtcaatatcagtccggcagaactgctcaagatacagacttactgcgccgaaaccccg
aaatattttcataaaaactttcatgcaaaactgtcggaaatctgcagcaatttttctgac
tgggcggtacagctgagtgaacagaagggtatgtgcttctttgatcctgagctgtgcaag
ctggtgctgaagttatgttatctgctgcgtaataaaactgattttcagccagccaagcag
cgttttaccaaaagctgtagcgaagaagagcagcagtatttcctcagccatccgctgatc
tgtgccatcgaagccctgtgcaatgtgaaacaggcactggatgagaaattcaaacagctc
acggcttatctggaatatcacctgattcgcagtgtgcagcatcgtctgccacagacctta
cagaagcagggagagactaccttctcgcaacagatccgtaccctgactgaagccttgcaa
ggtgagcaggggcgccgttttgcccagtttgtgcagtctcgttatcccttaattctggta
gatgaatttcaggacactaaccaggatcaggacgatctgctggcacgaatctggcgagat
gctgcgcgggtacagctcggctgtatgatcatggtcggtgatccaaaacaggcaatttac
ggtttccgtggcggcgacatgctgacctataacaaggcacatgctgatgtccgtttaaag
cagggccatgaatataccctgacccagaaccaccgctcggtcaaagctttggtggaagtg
gttgatgccctgttccagcgccggatggattttggtgaaagtgttaattatagtttgatt
caggctggtagtcgtccccatccggacctgattgattccggacaagctaatccttatcca
ttacgctggatgcagctaggtgagcaggagcatgaagccgatcaggtggcctggaaaatc
cgcgaattactgaatcaatctgcacagcaacaactgtatttccagcagcaggaaagttct
gctcctctaactgaggatgatattgctgtactgtcctttggacattatgcgctggaacag
gtcaagcagcgtctgcaacggacggggattgcctgttataaggagtcaaaacagagtgtc
tttgccagtaatgtggcacaggatgtcgccgcggtgctgaccgcgatcatggacccgttt
aatgaggccaaggttcgtcgtgctttagtgacccgtctgctcggctttgacctgaaaaag
ctgctggagctgcaacagcagccagttggcctaagtacttttattgccgattttgaggtg
atccgggaaatgtggttcgacaagggcttcctgagtgcttggaactatgccctgaacctg
tttgacgtctggactaatctggtatcgagccagagcattgataatgagcgtgttgtggtc
aatctgcgtcatctgaccgaaattctgtcgcagcaaagcgaatattatcagggtgcacag
aaactgtattactggtatctgcgccagctacagtctccttctggcaaggacagcgaaaaa
gagcgcaagctctctggcgatcgtggcgtacagttgctgacaatccatgcctccaaaggt
cttgaattcaaaatcgtattcctgatgggcgctgatgcgccgtttgacgtcaacaaaggt
aaccttaacttctcgctggccggtcatgagcaggacgatattctgaatcagtcacgagtg
attgcggtaaatcgtgaggatctgcatgaacaggcacagctgcagaatgcagcacggaat
gctgcagagaatcaccgtctctggtatgtggcgctaacgcgtgccagccatcgggtttac
gccatgctgcaggatcagagtggtcaatcagattcgtgtctggcctactggcgtgggcag
ggtgagcaggtcttccagcacccgctcagctgtatggaaaataccttaacagcagcgcca
ccgcgtattgcggtagaacggatgcaaacagcactggaattagttgctcatcctttaccg
gaacagcagttctatccacggaccaaaaccagcttcaccgctttatcgagacatcagctg
catgtaaccgtactgcaagatgatctggtcagtctgtatgaacacccagaaagtgctgcc
gatgaaatccatctgcagacagaagcagaagtgctgcaacagccattggactggatcaag
ctgaattttcctaaaggtactgtggccggaactttcttgcacagtatttttgagcatctg
gattttcaggatagcagttactggaatctggaaatccgccgccgtttcaaaaataccgcg
ccacatatctggatggaactgaaagaccagttccagcaggactttcagattctgcagcga
ctgcagcaggccttccagcagtattatctgcaggccacgattaacctgaatactctgttt
aaacgggtagccagtaatgccagcttaaaagcaggagcgctagctgaggctattttgcat
gttatggccagcatcaactacaaactgttgaccggtatccgcttgcatgaccaaagtgtt
gcctatcgccatacatggcacagctttttccagcagccatctttagatgtcactcatttt
ctacagtttatgacgcagtttgagcgttattttctggaactggatgatgatgcctttatt
cagcagtttgagcaggaaatggggcagctgcctaaagcaagcacgcatgaaaatcttgat
gtgactagactaatgcagcagtcagcgaatctattctttgaagaattatccgaagatatt
ctgctgaatctaatgcatgattgggtcggggaaatcctgaacacaccgattcagagcgag
tttcgtttaagccagctggatcagcacagctttttgtcggaattcccgttttatctggct
ttgaatgatgccccgttacagattcgccagattcagcagctgtttgtggattatggcctg
atcatgccggactttaatgaggccaaatcggcacgttacctgaccggggcaattgacctg
gtatattttgatggtcagcgctatcacatcgctgattataagagtaactatctcggtgcc
aatcagcaggattatctgccggaagcaattcatgacagcatgacgcattccagttactgg
ttgcaggctgccctgtatctggtcgccatgcaccgctatttaagcgctaatttgcagggt
tatgacatccggcagcatctgggtggagcgacctatttgtatctgcgtggcatgaatggg
caggccggacaggggctatatcactggcagcctgaagttgaatttatccaaaaattggat
catattctgggctattatgcggtgaataagtcagcataa
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