Acinetobacter schindleri: AsACE_CH01067
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Entry
AsACE_CH01067 CDS
T04787
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
asj
Acinetobacter schindleri
Pathway
asj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AsACE_CH01067 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asj03019
]
AsACE_CH01067 (rhlB)
Enzymes [BR:
asj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AsACE_CH01067 (rhlB)
Messenger RNA biogenesis [BR:
asj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AsACE_CH01067 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
UvrA_inter
Toprim
CMS1
Glyoxalase
UPF0228
Motif
Other DBs
NCBI-ProteinID:
APX62483
LinkDB
All DBs
Position
1141637..1142788
Genome browser
AA seq
383 aa
AA seq
DB search
MSSGFETLNLHPNLKQAIDALGFSSMTPIQEKVLKFTLAGHDAIGRAQTGTGKTAAFLVS
IINDLLNNPVQEQRYRGEPRALILAPTRELALQIESDAHELTKFTDLSVVTLLGGVDFDK
QKAQLDKAPVDIMVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRF
SPRKEQRQTLMFSATFSYDVLNLAQQWLFEPVTVEIEPEKKTNADVEQRVYMVAKADKYK
LLQEILRDEPIEKVMIFANRRDQVRKLYDHLKRDNYKVVMLSGEIAQDKRLKMLDQFKNG
KHNIMIATDVAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTGRAGTRGVSISFLSEDDA
FYLPEIEKAIGQKLPLTRLEGYC
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctggttttgaaaccttaaatttacatcctaatctaaaacaagcgattgatgct
ttaggcttttcttctatgacgcctattcaggagaaggttttaaaattcacattggcaggt
cacgatgcaattggtcgtgcgcaaacgggtacgggcaaaacagcggccttcctggtgagt
atcatcaatgatctattgaataatcctgttcaggaacagcgttatcgtggtgagccacgt
gcactgattctggcaccgactcgtgaacttgcactacaaatcgaaagtgatgcgcatgag
ctgaccaagtttactgatctgagtgtcgtgacgctgcttggtggtgtggattttgacaag
caaaaagcacagctcgataaggcacctgtggacatcatggttgctactccaggtcgcttg
attgactttgttgaacaaaaagaagtttggttagatcagattgaattcctggtgattgat
gaagcagaccgcctgctggatatgggctttatcccttcagtgaaacgtatcgtacgtttc
tcgccacgtaaggaacagcgccaaactttgatgttctcggcaacttttagctatgacgta
ttgaatctggcacaacagtggttatttgaacccgtaacggttgaaattgagccagaaaag
aaaaccaatgcggacgttgaacaacgtgtatatatggttgccaaggcagataaatataaa
ctgctacaagaaattttgcgtgatgaaccgattgagaaggtcatgatttttgccaaccgt
cgtgatcaggtgcgtaaactctatgatcatctgaaacgtgacaactataaagtggtgatg
ctgtctggtgaaattgcccaagacaagcgcttaaaaatgctggaccagtttaaaaatgga
aaacacaatatcatgatcgcaactgatgtagcaggtcgtggtattcatgtggatggtgta
tcgcatgtagtaaactttaccctgccagaacagtctgatgactatgtacaccgtattggt
cgcactggacgggccgggactcgtggtgtcagtatcagtttcctgtcggaagacgatgcg
ttctatcttccagaaattgaaaaagcgattggtcaaaaattaccattgacccgcctggaa
ggctattgctaa
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