Aliarcobacter skirrowii: EI285_00160
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Entry
EI285_00160 CDS
T05743
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ask
Aliarcobacter skirrowii
Pathway
ask03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ask00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EI285_00160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ask03019
]
EI285_00160
03009 Ribosome biogenesis [BR:
ask03009
]
EI285_00160
Enzymes [BR:
ask01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EI285_00160
Messenger RNA biogenesis [BR:
ask03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EI285_00160
Ribosome biogenesis [BR:
ask03009
]
Prokaryotic type
rRNA helicases
EI285_00160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Cas3-like_C_2
NAT10_TcmA_helicase
Ribosomal_L12_N
Motif
Other DBs
NCBI-ProteinID:
AZL53061
UniProt:
A0AAW9D7J7
LinkDB
All DBs
Position
30997..32484
Genome browser
AA seq
495 aa
AA seq
DB search
MTFQDFNFKEKLQKAIDEAGFKEPSPIQVDAIPHILAGKDIVGQAHTGTGKTAAFGLPVL
NQLTGKNAEAVVIVPTRELAMQVSDELFKFGKLLGINTATVYGGQSYSRQLKLIETASII
VATPGRFLDLLRSGQIKIQPKFVILDEADEMLDMGFLDDIKEIFTFLPSERQTLLFSATM
PVAIRNLAKTILKEPEFVTITKSDVTNKNITQTFYVVDERERDDALIRLFDYKNPKKSII
FCRTKKDVDRLSTFLISQGFMAKSLHGDMEQKQREEAIKAFKTSKLEILIATDVAARGLD
VNDVTHVFNYHLPFDGESYVHRIGRTGRAGKEGVAISIVTPHEFKTLQRIEHTIGTKLES
KVVPNISTVKEKKIDDLKKSIITQEIKDYAIELVESLKEEFDVSTIAFKLASIIASKTYV
KGNNNIGKNEVDLKRLTEMLSKVTDRNDDRRGHRGRGQGNRNSRGAGASRSRQRSSSGSK
ERSGSNRSPRSRRAD
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtgacttttcaagattttaattttaaagaaaaattacaaaaagcaatagacgaagctggt
tttaaagaaccaagcccaatacaagttgatgcaataccacatattttagcaggtaaagat
attgttggacaagctcatacaggaacaggaaaaactgcagcatttggattgccagtttta
aaccaattaacaggtaaaaatgctgaagcagttgttatagttccaacaagagaactggca
atgcaagtctcagatgagttatttaaatttggaaaacttttaggaattaatactgcaact
gtttatggtggacaatcatattcaagacaattaaaattaattgaaacagcaagtattatt
gtagcaactccaggaagatttttggatttactaagaagtggacaaataaaaattcaacca
aaatttgtaattttggatgaagctgatgagatgcttgatatgggatttttagatgatatc
aaagagatatttacatttttaccaagtgagagacaaactctacttttctctgcaacaatg
ccagtagcaataagaaatcttgcaaaaacaattttaaaagagccagagtttgtaacaatt
acgaaatcagatgttacaaataaaaatattacgcaaactttttatgttgtagatgagaga
gaaagagatgatgcactaataagactttttgattataaaaatccaaaaaaatctattata
ttttgtagaacaaaaaaagatgttgatagattatctacatttttaatctctcaaggtttt
atggctaaatctcttcatggagatatggagcaaaaacaaagagaagaggcaattaaagca
tttaaaacttctaaacttgaaattctaattgctacagatgttgcagcacgtggattagat
gttaatgatgtaacacatgtatttaattatcatttaccatttgatggtgagtcttatgtt
catagaattggaagaactggacgagcaggtaaagaaggagttgcaatatctattgtaact
ccacatgagtttaaaactcttcaaagaattgaacatactattggaactaagcttgaatct
aaagttgtaccaaatattagtacagtaaaagagaaaaaaatagatgatttaaaaaaatct
attattactcaagagataaaagattatgcaattgaattagttgaaagtttaaaagaagag
tttgatgtttcaacaattgcatttaaattagcttcaattattgcatcaaaaacttatgta
aaaggtaacaacaatattggtaaaaatgaagttgatttaaaaagattaactgaaatgtta
tcaaaagttacagatagaaatgatgatagaagaggacatagaggcagaggtcaaggaaat
agaaatagtagaggtgctggagcttcaagatcaagacaaagaagctcaagtggttctaaa
gagagatcaggatcaaatagatctcctagaagtagaagagccgactaa
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