Aliarcobacter skirrowii: EI285_05560
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Entry
EI285_05560 CDS
T05743
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ask
Aliarcobacter skirrowii
Pathway
ask03030
DNA replication
ask03430
Mismatch repair
ask03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ask00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EI285_05560
03430 Mismatch repair
EI285_05560
03440 Homologous recombination
EI285_05560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ask03032
]
EI285_05560
03400 DNA repair and recombination proteins [BR:
ask03400
]
EI285_05560
Enzymes [BR:
ask01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EI285_05560
DNA replication proteins [BR:
ask03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EI285_05560
DNA repair and recombination proteins [BR:
ask03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EI285_05560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AZL54074
LinkDB
All DBs
Position
complement(1048937..1049746)
Genome browser
AA seq
269 aa
AA seq
DB search
MKSFKKKYILKPIKPNFIDIIRRLKKEPIEFNEFLSLLEIYSDKFYESSELEFELLLING
FPLDIKDNFVYLRTTNTLIEDQTFCFVDIETNGGSPNKGHQVIELGAVKYKNGQIIDKFD
SLVYAKEIPSFIQEVTNISPNMLLNAPRVEKVLKEFKEFLKDDVFVAHDIKFDYNFISQS
FEKYSLGKLLNRKLCTIDLSKRTIKSDKYGLSTLKEILKIDVQNHHRAYYDALTTSKIFE
ECLKNIDKNLIKTTEDLIAFSKSNNILKN
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcatttaaaaaaaagtatattttaaaaccaataaaaccaaactttattgatatt
attagaagattaaaaaaagagccaatagagtttaatgagtttttatctctgcttgaaata
tatagtgataagttttatgaaagtagtgaattagagtttgaactgcttttaataaatggg
tttccacttgatataaaagataattttgtctatttaagaactacaaacactttaatagag
gatcaaactttttgttttgttgatatagagacaaatggtggaagcccaaataaaggtcat
caagttattgagcttggtgctgtgaagtataaaaatgggcaaattatagataagtttgac
tctttggtctatgcaaaagagataccatcttttatacaagaggttacaaatatatctcca
aatatgcttttaaatgcaccaagagttgaaaaagtgttaaaagagtttaaagagttttta
aaagatgatgtatttgtggctcatgatataaaatttgattataactttatatcacagagt
tttgaaaagtatagtttaggaaaacttttaaatagaaaactttgcacaatagatttatca
aaaagaactataaaatcagataaatatggacttagtacactaaaagagattttaaaaatt
gatgtccaaaatcatcacagagcttattatgatgccctaacaacttcaaaaatttttgaa
gagtgtttaaaaaatatagataaaaatttgataaaaacaacagaagatttaatagctttt
agtaaatcaaataatattttaaaaaactag
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