KEGG   Aliarcobacter skirrowii: EI285_08110
Entry
EI285_08110       CDS       T05743                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
ask  Aliarcobacter skirrowii
Pathway
ask02024  Quorum sensing
ask03060  Protein export
ask03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ask00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    EI285_08110
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    EI285_08110
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    EI285_08110
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ask02044]
    EI285_08110
Enzymes [BR:ask01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     EI285_08110
Secretion system [BR:ask02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   EI285_08110
  Eukaryotic Sec-SRP protein
   EI285_08110
SSDB
Motif
Pfam: SRP54 SRP_SPB CbiA SRP54_N AAA_22 AAA_31 AAA_17 AAA_24 Zeta_toxin AAA AAA_18 AAA_19 AAA_30 AAA_16 nSTAND3 T2SSE AAA_14 APS_kinase ATP_bind_1 KTI12 Fer4_NifH Helicase_RecD MeaB ResIII GTP_EFTU NTPase_1 NPHP3_N Fe-ADH 6PF2K YqeC AAA_33 AAA_28
Other DBs
NCBI-ProteinID: AZL54532
LinkDB
Position
complement(1542581..1543933)
AA seq 450 aa
MFDSITSSIRGVVNKIRHQDDVASLSRAISELKKAFLKADVHHKTTKELLTNIELSVKNI
GIGQDNFIKVLKEELEKVLTANGNQGFVFSSTPPTKILMTGLQGSGKTTTTGKLANYLKL
RNKKVLVAACDLQRLAAVEQLKQIAKQIDVDIYFDDNEKNPIKIAQAAVEKAKKEHYDVV
LIDTAGRLAIDDELMSELKDVKDAINPSEIFYVADSMTGHDATKTATTFKEKIGIDGVIL
SKYDGDTKGGVALSIAHQVEVPLRFIGIGEKMPDLEVFIPDRVVSRLLGLGDIAGLAEKT
ATLIDEKKAKEVSRKIKKGEFNFNDFLEQLQMLSKLGSLKSIMGMIPGLSNMMPALKDMD
FENSKEIVRIKALISSMTPKERENPDLLNPSRKKRISAGAGLSEVQVNKILKQFKNASKM
AKQLSNKGGMKGFTNMLSQMGPNGIPKIPR
NT seq 1353 nt   +upstreamnt  +downstreamnt
ttgtttgattcaataactagctcaattagaggtgttgtaaataagataagacatcaagat
gatgttgcatcattaagtcgtgctattagtgaactaaaaaaagcatttttaaaagctgat
gttcaccataaaacgacaaaagagttattaactaatattgagttgagtgtaaaaaatatt
ggaattggacaagataacttcataaaagttctaaaagaagagcttgaaaaagttttaaca
gcaaatggaaatcaaggttttgtattctcttcaacacctccaacaaaaattttaatgaca
ggtcttcaaggaagtggtaaaactactacaactggaaaattagcaaactatttaaaacta
agaaataaaaaagttttagtagctgcttgtgacttacaaagacttgcagctgttgagcag
ctaaaacagattgcaaaacaaattgatgttgatatctattttgatgataatgagaaaaat
cctataaaaattgcacaagctgcagttgagaaagcaaaaaaagagcattatgatgttgtt
ttaatagatacagctggaagacttgctattgatgatgagcttatgagtgagcttaaagat
gttaaagatgctataaatccaagtgagattttttatgttgcagactctatgacaggtcat
gatgcaacaaaaacagcaactacatttaaagagaaaattggaattgatggagttatatta
tcaaaatatgatggtgatacaaaaggtggagttgcacttagtattgctcaccaagtagaa
gttccattaagatttattggtattggtgaaaaaatgccagatttggaagtttttattcca
gatagagttgtttcaagacttttaggacttggggatattgctggacttgctgaaaaaaca
gctactttaatagatgagaaaaaagcaaaagaggtaagtagaaagataaaaaaaggtgaa
ttcaactttaatgactttttagaacagcttcaaatgttaagtaaacttggaagtttaaaa
tctattatgggaatgattccaggcttatcaaatatgatgccagctttaaaggatatggat
tttgaaaactctaaagagatagttagaattaaagctttaattagttcaatgactccaaaa
gagagagaaaatccagatttactaaatcctagtagaaaaaaaagaatctcagcaggtgct
ggtttaagtgaagttcaggtaaataagattttaaaacagtttaaaaatgcttcaaaaatg
gcaaaacagctttcaaacaaaggtggaatgaaaggttttacaaatatgttgtctcaaatg
ggaccaaatggaataccgaaaattccaagatag

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